RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ARPC5LQ9BPX5 153 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 ECSITQ9BQ95 431 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 USP29Q9HBJ7 922 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
SF3A3-201ENST00000373019 RGPD2P0DJD1 1756 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 COL18A1P39060 1754 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 BAZ2BQ9UIF8 2168 aaKnown RBP10.21□□□□□ -0.78
SF3A3-201ENST00000373019 FAM187AA6NFU0 413 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 DDX3YO15523 660 aaKnown RBP10.21□□□□□ -0.78
SF3A3-201ENST00000373019 DCTN3O75935 186 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 SMARCA1P28370 1054 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 DNAJC3Q13217 504 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 RRP1BQ14684 758 aaKnown RBP10.21□□□□□ -0.78
SF3A3-201ENST00000373019 ALX1Q15699 326 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 EAPPQ56P03 285 aaPredicted RBP10.21□□□□□ -0.78
SF3A3-201ENST00000373019 KLHL35Q6PF15 583 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 UNC13DQ70J99 1090 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 IRF2BP2Q7Z5L9 587 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 IFNL3Q8IZI9 196 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 RBM46Q8TBY0 533 aaKnown RBP10.21□□□□□ -0.78
SF3A3-201ENST00000373019 C18orf8Q96DM3 657 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 DDX18Q9NVP1 670 aaKnown RBP10.21□□□□□ -0.78
SF3A3-201ENST00000373019 HEY1Q9Y5J3 304 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 TIAM2Q8IVF5 1701 aa10.21□□□□□ -0.78
SF3A3-201ENST00000373019 SMIM31A0A1B0GVY4 71 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 ANKRD63C9JTQ0 380 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 TP73O15350 636 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 CETPP11597 493 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 RGS2P41220 211 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 TRAPPC10P48553 1259 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 VPS41P49754 854 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 DSG1Q02413 1049 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 ST13P4Q8IZP2 240 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 DGCR14Q96DF8 476 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 HSPBAP1Q96EW2 488 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 BTBD10Q9BSF8 475 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 EBF3Q9H4W6 596 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 TUT1Q9H6E5 874 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 BTBD7Q9P203 1132 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 ARMCX3Q9UH62 379 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 NAGPAQ9UK23 515 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 GOLGB1Q14789 3259 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 NRAPQ86VF7 1730 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 TCRBV5S4A2TA0A5A2 114 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 CIAO1O76071 339 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 AMPD1P23109 780 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 RAPGEF1Q13905 1077 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 PLEKHG4Q58EX7 1191 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 CLNKQ7Z7G1 428 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 C7orf43Q8WVR3 580 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 TMEM60Q9H2L4 133 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 CYLDQ9NQC7 956 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 NENFQ9UMX5 172 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 ZNF711Q9Y462 761 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 FLT1P17948 1338 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 ZNF532Q9HCE3 1301 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 KANSL1LA0AUZ9 987 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 COL6A2P12110 1019 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 GEMIN4P57678 1058 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 TBL3Q12788 808 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 CDC16Q13042 620 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 DHX34Q14147 1143 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 ZDHHC14Q8IZN3 488 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 SH3RF3Q8TEJ3 882 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 PTCD3Q96EY7 689 aaKnown RBP10.2□□□□□ -0.78
SF3A3-201ENST00000373019 C7orf25Q9BPX7 421 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 NAPBQ9H115 298 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 CNNM2Q9H8M5 875 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 SLC52A2Q9HAB3 445 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 AAASQ9NRG9 546 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 FAIMQ9NVQ4 179 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 UBAP1Q9NZ09 502 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 GRID1Q9ULK0 1009 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 MYH3P11055 1940 aa10.2□□□□□ -0.78
SF3A3-201ENST00000373019 PLCG2P16885 1265 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ARFIP2P53365 341 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 MTTPP55157 894 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 SEC23AQ15436 765 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 INF2Q27J81 1249 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 MFSD6Q6ZSS7 791 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ARHGEF18Q6ZSZ5 1173 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 TRIM67Q6ZTA4 783 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 MTDHQ86UE4 582 aaKnown RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 LSM14BQ9BX40 385 aaKnown RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 CCSER1Q9C0I3 900 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 CDC42EP4Q9H3Q1 356 aaKnown RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 TRPV5Q9NQA5 729 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 PIH1D3Q9NQM4 214 aaKnown RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 SAR1AQ9NR31 198 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ASAP1Q9ULH1 1129 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 PPP1R9AQ9ULJ8 1098 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ATAD5Q96QE3 1844 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 PCSK6P29122 969 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 HNRNPDQ14103 355 aaKnown RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 C10orf76Q5T2E6 689 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 TTC27Q6P3X3 843 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms