RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 GPRASP2Q96D09 838 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 HIPK3Q9H422 1215 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 RIOX1Q9H6W3 641 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 SLC12A6Q9UHW9 1150 aa7.53□□□□□ -1.2
RAB5B-201ENST00000360299 HIP1RO75146 1068 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CALB1P05937 261 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CASP1P29466 404 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ARL1P40616 181 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 RFC5P40937 340 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 RWDD2BP57060 319 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GPC5P78333 572 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CCDC144BQ3MJ40 725 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CASC4Q6P4E1 433 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GPD1LQ8N335 351 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 BEST2Q8NFU1 509 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SENP2Q9HC62 589 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 TBKBP1A7MCY6 615 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GAS2O43903 313 aaKnown RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 TAL1P17542 331 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 OAS2P29728 719 aaKnown RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ARL4AP40617 200 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 HIRAP54198 1017 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SLMAPQ14BN4 828 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 VEPH1Q14D04 833 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 LY6KQ17RY6 165 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SGO2Q562F6 1265 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SPATS2Q86XZ4 545 aaKnown RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 LRRC71Q8N4P6 559 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 POLR3FQ9H1D9 316 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 MAGED2Q9UNF1 606 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GOLGA8IPA6NC78 632 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GOLGA8JA6NMD2 632 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 PODXLO00592 558 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 NFIBO00712 420 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GIPC1O14908 333 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ZC3H11AO75152 810 aaKnown RBP eCLIP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ECEL1O95672 775 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 FGBP02675 491 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 MYBL1P10243 752 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CTNNB1P35222 781 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ARHGAP25P42331 645 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 PTPAQ15257 358 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CEP85LQ5SZL2 805 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CDKL2Q92772 493 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SH2D3AQ9BRG2 576 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 VTA1Q9NP79 307 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SYNJ2BP-COX16A0A087WUM0 186 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 RSPH10B2B2RC85 870 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 I3L4J1 428 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 P4HA2O15460 535 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 RNF40O75150 1001 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ZNF189O75820 626 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 RSPH10BP0C881 870 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GHRP10912 638 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 GPC3P51654 580 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SLC12A2P55011 1212 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 TSPY1Q01534 308 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 CYP27A1Q02318 531 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 PRPSAP1Q14558 356 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 MFSD10Q14728 455 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 NTRK3Q16288 839 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 ANKRD40Q6AI12 368 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 TTC13Q8NBP0 860 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 FBXL13Q8NEE6 735 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 FAM149B1Q96BN6 582 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 SETD4Q9NVD3 440 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 COX16Q9P0S2 106 aa7.52□□□□□ -1.21
RAB5B-201ENST00000360299 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
RAB5B-201ENST00000360299 TTC26A0AVF1 554 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 LRRC53A6NM62 1247 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 H7C0C1 242 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ENC1O14682 589 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 GPR182O15218 404 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 FOXN1O15353 648 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PEX10O60683 326 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ITGA4P13612 1032 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ATP5OP48047 213 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PPIGQ13427 754 aaKnown RBP eCLIP7.51□□□□□ -1.214e-7■□□□□ 11.3
RAB5B-201ENST00000360299 CUL1Q13616 776 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 CCDC6Q16204 474 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 DUOXA2Q1HG44 320 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ZNF697Q5TEC3 545 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ADGRG1Q9Y653 693 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 SYNGAP1Q96PV0 1343 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 SHANK3Q9BYB0 1731 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 MCF2LO15068 1137 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 HEXIM1O94992 359 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 MOCS3O95396 460 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 GCLMP48507 274 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 GOLGA8FQ08AF8 430 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 GOLGA8DPQ0D2H9 430 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PTPROQ16827 1216 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 MAP7D1Q3KQU3 841 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 EFCAB12Q6NXP0 572 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 CNPY4Q8N129 248 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms