RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 MDM1Q8TC05 714 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 TEKT3Q9BXF9 490 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 IFIH1Q9BYX4 1025 aaKnown RBP11.14□□□□□ -0.63
ABCF1-201ENST00000326195 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 GDF3Q9NR23 364 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 MYPNQ86TC9 1320 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 CSDE1O75534 798 aaKnown RBP11.14□□□□□ -0.63
ABCF1-201ENST00000326195 DNAJC8O75937 253 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-201ENST00000326195 TMEM62Q0P6H9 643 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 RBBP5Q15291 538 aaKnown RBP11.14□□□□□ -0.63
ABCF1-201ENST00000326195 ECM1Q16610 540 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 MTERF2Q49AM1 385 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 TCERG1LQ5VWI1 586 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 CACNA2D3Q8IZS8 1091 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 METTL13Q8N6R0 699 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 BHMT2Q9H2M3 363 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 MAGEF1Q9HAY2 307 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 NID2Q14112 1375 aa11.14□□□□□ -0.63
ABCF1-201ENST00000326195 PFASO15067 1338 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
ABCF1-201ENST00000326195 MAGEA1P43355 309 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 CD302Q8IX05 232 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 DAGLBQ8NCG7 672 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 LARP4BQ92615 738 aaKnown RBP11.13□□□□□ -0.63
ABCF1-201ENST00000326195 BATF3Q9NR55 127 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 AGAP1Q9UPQ3 857 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 PCDHGC5Q9Y5F6 944 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 MED24O75448 989 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 ALDH1A1P00352 501 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 MYL3P08590 195 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 USP11P51784 963 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-201ENST00000326195 OAZ1P54368 228 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 ZBED6P86452 979 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 IFFO1Q0D2I5 559 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 LRRC41Q15345 812 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 UAP1Q16222 522 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-201ENST00000326195 MEA1Q16626 185 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 NELFCDQ8IXH7 590 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 TRIB2Q92519 343 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 TRIM9Q9C026 710 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 SLC5A4Q9NY91 659 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 GGT7Q9UJ14 662 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 PTCH2Q9Y6C5 1203 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 ATAD5Q96QE3 1844 aa11.13□□□□□ -0.63
ABCF1-201ENST00000326195 HMGB1P1B2RPK0 211 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 H0YGN5 161 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 KCNJ2P63252 427 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 STK4Q13043 487 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 ACVR2BQ13705 512 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 ZNF662Q6ZS27 426 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 LENG9Q96B70 501 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 TLR10Q9BXR5 811 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 TSGA10Q9BZW7 698 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 NDST4Q9H3R1 872 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 NFS1Q9Y697 457 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 C5orf60A6NFR6 353 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 FKTNO75072 461 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 CLSTN1O94985 981 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 SNAI1O95863 264 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 CCNE2O96020 404 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 RGS2P41220 211 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 SSR1P43307 286 aaKnown RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 UGCGQ16739 394 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 SLC5A9Q2M3M2 681 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 XKR9Q5GH70 373 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 ANKRD40Q6AI12 368 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 RETREG2Q8NC44 543 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 EIF2AK1Q9BQI3 630 aaKnown RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 JPH1Q9HDC5 661 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 G3BP2Q9UN86 482 aaKnown RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 MCM3APO60318 1980 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 RHOBTB3O94955 611 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 DRD4P21917 467 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 TNFRSF8P28908 595 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 MTFR1Q15390 333 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 FAM133BQ5BKY9 247 aaKnown RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 HERC4Q5GLZ8 1057 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
ABCF1-201ENST00000326195 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
ABCF1-201ENST00000326195 A0A1W2PQC6 194 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 HSPA1AP0DMV8 641 aaKnown RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 HSPA1BP0DMV9 641 aaKnown RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 FLT3P36888 993 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 HSD17B3P37058 310 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 TUBP50607 506 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 ITIH3Q06033 890 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms