RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 A0A0A6YYK5 440 aaPredicted RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 GSTTP1A0A1W2PQM5 241 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 GOLGA6BA6NDN3 693 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 HIP1RO75146 1068 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 PHACTR2O75167 634 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 GGPS1O95749 300 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 CYP2J2P51589 502 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 SLC7A5Q01650 507 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 MAPK7Q13164 816 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 LEKR1Q6ZMV7 388 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 SND1Q7KZF4 910 aaKnown RBP eCLIP15.35■□□□□ 0.05
VRK3-201ENST00000316763 SLC9A9Q8IVB4 645 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 SCFD2Q8WU76 684 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 FIZ1Q96SL8 496 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 STK33Q9BYT3 514 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 KATNBL1Q9H079 304 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 VTA1Q9NP79 307 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 RBM47A0AV96 593 aaKnown RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 BACH1O14867 736 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 SORBS3O60504 671 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 SYF2O95926 243 aaKnown RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 MAPTP10636 758 aaKnown RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 SOX5P35711 763 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 CTCFP49711 727 aaPredicted RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 LBX1P52954 281 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 TNNC1P63316 161 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 NNTQ13423 1086 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 TAPT1Q6NXT6 567 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 OTUD6AQ7L8S5 288 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 SYCE1Q8N0S2 351 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 DAW1Q8N136 415 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 AFAP1L1Q8TED9 768 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 GDAP1L1Q96MZ0 367 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 TINF2Q9BSI4 451 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 LARSQ9P2J5 1176 aaKnown RBP15.35■□□□□ 0.05
VRK3-201ENST00000316763 TRIM17Q9Y577 477 aa15.35■□□□□ 0.05
VRK3-201ENST00000316763 TMEM150BA6NC51 233 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 EXOC3O60645 756 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 KIF4AO95239 1232 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 KRT13P13646 458 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 GGCXP38435 758 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 DNA2P51530 1060 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 NPEPPSP55786 919 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 PRKCEQ02156 737 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 TTLL4Q14679 1199 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 SEPT1Q8WYJ6 367 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 CAVIN3Q969G5 261 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 PCYT2Q99447 389 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 TMEM206Q9H813 350 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 FAM204AQ9H8W3 233 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 PDGFCQ9NRA1 345 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.34■□□□□ 0.05
VRK3-201ENST00000316763 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
VRK3-201ENST00000316763 NENFQ9UMX5 172 aa15.34■□□□□ 0.05
VRK3-201ENST00000316763 OPA1O60313 960 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 IGHA2P01877 340 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 TXNP10599 105 aaKnown RBP15.33■□□□□ 0.05
VRK3-201ENST00000316763 CAPN2P17655 700 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 RFX1P22670 979 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 ACTN2P35609 894 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 MYL7Q01449 175 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 PAK2Q13177 524 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 IRF5Q13568 498 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 XKR3Q5GH77 459 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 ALS2CLQ60I27 953 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 OLFML2BQ68BL8 750 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 PLA2G4FQ68DD2 849 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 KSR1Q8IVT5 923 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 U2AF1L4Q8WU68 220 aaKnown RBP15.33■□□□□ 0.05
VRK3-201ENST00000316763 VTI1AQ96AJ9 217 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 STRA6Q9BX79 667 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 ZNF302Q9NR11 478 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 DNAJC12Q9UKB3 198 aa15.33■□□□□ 0.05
VRK3-201ENST00000316763 DOCK5Q9H7D0 1870 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 F8VZ95 297 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 K7ENM7 598 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 KCNK3O14649 394 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 PPP1R37O75864 691 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 CLSTN1O94985 981 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 ATP4AP20648 1035 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 HNRNPH2P55795 449 aaKnown RBP15.33■□□□□ 0.04
VRK3-201ENST00000316763 CETN1Q12798 172 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 XKR9Q5GH70 373 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 GJB7Q6PEY0 223 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 TPCN2Q8NHX9 752 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 TRIB2Q92519 343 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 CCDC43Q96MW1 224 aaKnown RBP15.33■□□□□ 0.04
VRK3-201ENST00000316763 ACCSQ96QU6 501 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 RUFY1Q96T51 708 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 GPR20Q99678 358 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 INTS2Q9H0H0 1204 aaKnown RBP15.33■□□□□ 0.04
VRK3-201ENST00000316763 GDF3Q9NR23 364 aa15.33■□□□□ 0.04
VRK3-201ENST00000316763 AJAP1Q9UKB5 411 aaPredicted RBP15.33■□□□□ 0.04
VRK3-201ENST00000316763 PACSIN2Q9UNF0 486 aaPredicted RBP15.33■□□□□ 0.04
VRK3-201ENST00000316763 DDX3XO00571 662 aaKnown RBP eCLIP15.32■□□□□ 0.043e-12■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms