RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Stxbp5lQ5DQR4 1185 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 TdrpQ8C5P7 182 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Erich5Q8K0S2 362 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Tmem191cQ9JJB1 302 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Dcaf17Q3TUL7 519 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ttbk2Q3UVR3 1243 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ccdc160Q3UYG1 323 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Sec23ipQ6NZC7 998 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ppp2r5aQ6PD03 486 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Kcnt1Q6ZPR4 1224 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gtf2ird1Q9JI57 1104 aaKnown RBP18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Mroh8E9PYI4 1049 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Pitpnm1O35954 1243 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 BC051142Q3V0M8 400 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Hook3Q8BUK6 718 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm4297D3YWB7 211 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Hcls1P49710 486 aaKnown RBP18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ripk2P58801 539 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ppp1r13bQ62415 1087 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Snx19Q6P4T1 997 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 OlahQ8R197 265 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Uroc1Q8VC12 676 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 SmtnQ921U8 923 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Adarb2Q9JI20 745 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Mapk8ip1Q9WVI9 707 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 MycsQ9Z304 431 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm1141B9EJU1 475 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm10110D3Z5M2 615 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Pdia2D3Z6P0 527 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cyth3O08967 399 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cyp2e1Q05421 493 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ptger2Q62053 362 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 WaplQ65Z40 1200 aaKnown RBP18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 B3glctQ8BHT6 489 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Mageb18Q8BQR7 327 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rapgef3Q8VCC8 918 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Stx18Q8VDS8 334 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Bhmt2Q91WS4 363 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Acsl3Q9CZW4 720 aaKnown RBP18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Hao1Q9WU19 370 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ugt1a9Q62452 528 aa18.04■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Lrrc38A2VDH3 298 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cfap221A9Q751 836 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 MttpO08601 894 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Tm4sf1Q64302 202 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Smg5Q6ZPY2 1017 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Smim5Q8BT42 78 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Arhgap18Q8K0Q5 663 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gpsm2Q8VDU0 679 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cep19Q9CQA8 163 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cntnap2Q9CPW0 1332 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Lrrc74aA0A1Y7VMD6 494 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Vmn2r72D3Z4N8 856 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gnat1P20612 350 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cd68P31996 326 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Mphosph8Q3TYA6 858 aaKnown RBP18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Dzip1lQ499E4 774 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 IqceQ6PCQ0 778 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Nap1l4Q78ZA7 375 aaKnown RBP18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rusc1Q8BG26 893 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Tbc1d10cQ8C9V1 444 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 YarsQ91WQ3 528 aaKnown RBP18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 IqcdQ9D3V1 458 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 NgdnQ9DB96 315 aaKnown RBP18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Col4a5Q63ZW6 1691 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm3095E9Q058 166 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ppfibp2O35711 882 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Bend4P86174 541 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 SrlQ7TQ48 910 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm5622Q810Q0 167 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Fam90a1bQ9D4F3 419 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Arhgef7Q9ES28 862 aa18.03■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Card9A2AIV8 536 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ccnb1P24860 430 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Crnkl1P63154 690 aaKnown RBP18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Zbtb39Q6PDK0 712 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Kbtbd2G3X9X1 623 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Pcdha4O88689 947 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 HdgfP51859 237 aaKnown RBP18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ythdf1P59326 559 aaKnown RBP18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Nrp1P97333 923 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Slc44a4Q91VA1 707 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Pcdha10Q91Y20 946 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Tdrd12Q9CWU0 1215 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Clstn1Q9EPL2 979 aa18.02■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Fbf1A2A870 1173 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Gm3127E9Q9P5 263 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Gm3453K7N724 263 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 St3gal1P54751 337 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Kiaa0319Q5SZV5 1081 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Dlg4Q62108 724 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Orai2Q8BH10 250 aa18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 NemfQ8CCP0 1064 aaKnown RBP18.02■□□□□ 0.47
Ctcf-201ENSMUST00000005841 RpsaP14206 295 aaKnown RBP18.01■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Eno1P17182 434 aaKnown RBP18.01■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Bicd1Q8BR07 835 aa18.01■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Bmt2Q8BXK4 403 aa18.01■□□□□ 0.47
Ctcf-201ENSMUST00000005841 CntrobQ8CB62 887 aa18.01■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Pcdh18Q8VHR0 1134 aa18.01■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Tomm20lQ9D4V6 152 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms