Protein–RNA interactions for Protein: Q91Y20

Pcdha10, Protocadherin alpha-10, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha10Q91Y20 Gm25239-201ENSMUST00000174915 86 ntBASIC37.49■■■■□ 3.59
Pcdha10Q91Y20 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Pcdha10Q91Y20 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Pcdha10Q91Y20 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
Pcdha10Q91Y20 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Pcdha10Q91Y20 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Pcdha10Q91Y20 Gm15042-201ENSMUST00000120212 883 ntBASIC33.37■■■□□ 2.93
Pcdha10Q91Y20 Psd-208ENSMUST00000224556 2034 ntBASIC33.21■■■□□ 2.91
Pcdha10Q91Y20 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Pcdha10Q91Y20 Gm15045-201ENSMUST00000117359 883 ntBASIC32.75■■■□□ 2.83
Pcdha10Q91Y20 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Pcdha10Q91Y20 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pcdha10Q91Y20 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pcdha10Q91Y20 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.37■■■□□ 2.77
Pcdha10Q91Y20 Gm24109-201ENSMUST00000175489 103 ntBASIC32.2■■■□□ 2.75
Pcdha10Q91Y20 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Pcdha10Q91Y20 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcdha10Q91Y20 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pcdha10Q91Y20 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Pcdha10Q91Y20 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcdha10Q91Y20 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcdha10Q91Y20 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pcdha10Q91Y20 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pcdha10Q91Y20 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pcdha10Q91Y20 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pcdha10Q91Y20 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pcdha10Q91Y20 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.47■■■□□ 2.63
Pcdha10Q91Y20 Gm23366-201ENSMUST00000175022 89 ntBASIC31.39■■■□□ 2.62
Pcdha10Q91Y20 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcdha10Q91Y20 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pcdha10Q91Y20 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pcdha10Q91Y20 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Pcdha10Q91Y20 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pcdha10Q91Y20 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.18■■■□□ 2.58
Pcdha10Q91Y20 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pcdha10Q91Y20 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Pcdha10Q91Y20 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pcdha10Q91Y20 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Pcdha10Q91Y20 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
Pcdha10Q91Y20 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
Pcdha10Q91Y20 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.68■■■□□ 2.5
Pcdha10Q91Y20 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pcdha10Q91Y20 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.6■■■□□ 2.49
Pcdha10Q91Y20 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.53■■■□□ 2.48
Pcdha10Q91Y20 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.41■■■□□ 2.46
Pcdha10Q91Y20 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pcdha10Q91Y20 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Pcdha10Q91Y20 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcdha10Q91Y20 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Pcdha10Q91Y20 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Pcdha10Q91Y20 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcdha10Q91Y20 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pcdha10Q91Y20 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pcdha10Q91Y20 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pcdha10Q91Y20 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.76■■■□□ 2.35
Pcdha10Q91Y20 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.74■■■□□ 2.35
Pcdha10Q91Y20 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.72■■■□□ 2.35
Pcdha10Q91Y20 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdha10Q91Y20 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pcdha10Q91Y20 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pcdha10Q91Y20 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.62■■■□□ 2.33
Pcdha10Q91Y20 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Pcdha10Q91Y20 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pcdha10Q91Y20 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Pcdha10Q91Y20 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.57■■■□□ 2.32
Pcdha10Q91Y20 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pcdha10Q91Y20 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pcdha10Q91Y20 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pcdha10Q91Y20 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pcdha10Q91Y20 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pcdha10Q91Y20 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.42■■■□□ 2.3
Pcdha10Q91Y20 Gm25238-201ENSMUST00000174914 89 ntBASIC29.4■■■□□ 2.3
Pcdha10Q91Y20 Gm27325-201ENSMUST00000175467 74 ntBASIC29.39■■■□□ 2.3
Pcdha10Q91Y20 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
Pcdha10Q91Y20 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.28■■■□□ 2.28
Pcdha10Q91Y20 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Pcdha10Q91Y20 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Pcdha10Q91Y20 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Pcdha10Q91Y20 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pcdha10Q91Y20 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pcdha10Q91Y20 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdha10Q91Y20 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdha10Q91Y20 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdha10Q91Y20 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pcdha10Q91Y20 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.1■■■□□ 2.25
Pcdha10Q91Y20 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pcdha10Q91Y20 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pcdha10Q91Y20 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdha10Q91Y20 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Pcdha10Q91Y20 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pcdha10Q91Y20 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Pcdha10Q91Y20 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdha10Q91Y20 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdha10Q91Y20 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdha10Q91Y20 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pcdha10Q91Y20 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
Pcdha10Q91Y20 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdha10Q91Y20 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.8■■■□□ 2.2
Pcdha10Q91Y20 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Pcdha10Q91Y20 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms