RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	ISY1	P21374	235 aa	Predicted RBP	3.14	□□□□□ -1.91
USV1	YPL230W	POF1	P25576	258 aa		3.14	□□□□□ -1.91
USV1	YPL230W	INO2	P26798	304 aa		3.14	□□□□□ -1.91
USV1	YPL230W	VMA6	P32366	345 aa	Known RBP	3.14	□□□□□ -1.91
USV1	YPL230W	ASF2	P32448	525 aa	Predicted RBP	3.14	□□□□□ -1.91
USV1	YPL230W	AEP1	P32493	518 aa		3.14	□□□□□ -1.91
USV1	YPL230W	IES6	P32617	166 aa		3.14	□□□□□ -1.91
USV1	YPL230W	MGM101	P32787	269 aa	Known RBP	3.14	□□□□□ -1.91
USV1	YPL230W	SPT4	P32914	102 aa	Predicted RBP	3.14	□□□□□ -1.91
USV1	YPL230W	OM14	P38325	134 aa		3.14	□□□□□ -1.91
USV1	YPL230W	PET8	P38921	284 aa		3.14	□□□□□ -1.91
USV1	YPL230W	SHC1	P39000	512 aa		3.14	□□□□□ -1.91
USV1	YPL230W	THO1	P40040	218 aa	Known RBP	3.14	□□□□□ -1.91
USV1	YPL230W	YRB1	P41920	201 aa	Known RBP	3.14	□□□□□ -1.91
USV1	YPL230W	HAM1	P47119	197 aa	Known RBP	3.14	□□□□□ -1.91
USV1	YPL230W	IBA57	P47158	497 aa		3.14	□□□□□ -1.91
USV1	YPL230W	PER33	Q12144	273 aa		3.14	□□□□□ -1.91
USV1	YPL230W	YPL245W	Q12179	454 aa	Known RBP	3.14	□□□□□ -1.91
USV1	YPL230W	MHP1	P43638	1398 aa		3.13	□□□□□ -1.91
USV1	YPL230W	THP2	O13539	261 aa	Known RBP	3.13	□□□□□ -1.91
USV1	YPL230W	STE7	P06784	515 aa		3.13	□□□□□ -1.91
USV1	YPL230W	TPS2	P31688	896 aa	Known RBP	3.13	□□□□□ -1.91
USV1	YPL230W	YBR241C	P38142	488 aa		3.13	□□□□□ -1.91
USV1	YPL230W	SHE1	P38200	338 aa		3.13	□□□□□ -1.91
USV1	YPL230W	YER184C	P39961	794 aa		3.13	□□□□□ -1.91
USV1	YPL230W	VAB2	P40003	282 aa		3.13	□□□□□ -1.91
USV1	YPL230W	YRB2	P40517	327 aa		3.13	□□□□□ -1.91
USV1	YPL230W	GLG2	P47011	380 aa		3.13	□□□□□ -1.91
USV1	YPL230W	YMR226C	Q05016	267 aa	Known RBP	3.13	□□□□□ -1.91
USV1	YPL230W	PEX30	Q06169	523 aa		3.13	□□□□□ -1.91
USV1	YPL230W	TAZ1	Q06510	381 aa		3.13	□□□□□ -1.91
USV1	YPL230W	CTR3	Q06686	241 aa		3.13	□□□□□ -1.91
USV1	YPL230W	GET4	Q12125	312 aa		3.13	□□□□□ -1.91
USV1	YPL230W	SNF8	Q12483	233 aa		3.13	□□□□□ -1.91
USV1	YPL230W	BI3	Q9ZZW7	517 aa		3.13	□□□□□ -1.91
USV1	YPL230W	RPP0	P05317	312 aa	Known RBP	3.12	□□□□□ -1.91
USV1	YPL230W	RHO1	P06780	209 aa	Known RBP	3.12	□□□□□ -1.91
USV1	YPL230W	RAD51	P25454	400 aa		3.12	□□□□□ -1.91
USV1	YPL230W	ALK2	P32789	676 aa	Predicted RBP	3.12	□□□□□ -1.91
USV1	YPL230W	VPS21	P36017	210 aa	Known RBP	3.12	□□□□□ -1.91
USV1	YPL230W	SOL2	P37262	315 aa		3.12	□□□□□ -1.91
USV1	YPL230W	MAL32	P38158	584 aa		3.12	□□□□□ -1.91
USV1	YPL230W	DSN1	P40568	576 aa		3.12	□□□□□ -1.91
USV1	YPL230W	STB1	P42845	420 aa		3.12	□□□□□ -1.91
USV1	YPL230W	YJR012C	P47087	207 aa		3.12	□□□□□ -1.91
USV1	YPL230W	TPN1	P53099	579 aa		3.12	□□□□□ -1.91
USV1	YPL230W	MAL13	P53338	473 aa		3.12	□□□□□ -1.91
USV1	YPL230W	MAL12	P53341	584 aa		3.12	□□□□□ -1.91
USV1	YPL230W	NRM1	P53718	249 aa		3.12	□□□□□ -1.91
USV1	YPL230W	RNH201	P53942	307 aa		3.12	□□□□□ -1.91
USV1	YPL230W	YNL040W	P53960	456 aa	Predicted RBP	3.12	□□□□□ -1.91
USV1	YPL230W	ADD37	Q03233	198 aa		3.12	□□□□□ -1.91
USV1	YPL230W	GMC1	Q04399	608 aa		3.12	□□□□□ -1.91
USV1	YPL230W	YDR115W	Q04598	105 aa		3.12	□□□□□ -1.91
USV1	YPL230W	SEC10	Q06245	871 aa		3.12	□□□□□ -1.91
USV1	YPL230W	MHR1	Q06630	226 aa		3.12	□□□□□ -1.91
USV1	YPL230W	MIM1	Q08176	113 aa		3.12	□□□□□ -1.91
USV1	YPL230W	WTM1	Q12363	437 aa	Known RBP	3.12	□□□□□ -1.91
USV1	YPL230W	RPL21B	Q12672	160 aa	Known RBP	3.12	□□□□□ -1.91
USV1	YPL230W	SEY1	Q99287	776 aa		3.12	□□□□□ -1.91
USV1	YPL230W	RPS3	P05750	240 aa	Known RBP	3.11	□□□□□ -1.91
USV1	YPL230W	DAL81	P21657	970 aa		3.11	□□□□□ -1.91
USV1	YPL230W	MRPL20	P22354	195 aa	Predicted RBP	3.11	□□□□□ -1.91
USV1	YPL230W	HOM6	P31116	359 aa	Known RBP	3.11	□□□□□ -1.91
USV1	YPL230W	QRI5	P32344	111 aa		3.11	□□□□□ -1.91
USV1	YPL230W	YBR062C	P38239	180 aa		3.11	□□□□□ -1.91
USV1	YPL230W	SMB1	P40018	196 aa	Known RBP	3.11	□□□□□ -1.91
USV1	YPL230W	IGD1	P43598	195 aa		3.11	□□□□□ -1.91
USV1	YPL230W	SDS23	P53172	527 aa		3.11	□□□□□ -1.91
USV1	YPL230W	CUS2	P53830	285 aa	Predicted RBP	3.11	□□□□□ -1.91
USV1	YPL230W	RNY1	Q02933	434 aa	Known RBP	3.11	□□□□□ -1.91
USV1	YPL230W	YDR209C	Q03480	137 aa		3.11	□□□□□ -1.91
USV1	YPL230W	YML018C	Q03730	393 aa		3.11	□□□□□ -1.91
USV1	YPL230W	DPP1	Q05521	289 aa		3.11	□□□□□ -1.91
USV1	YPL230W	DCR2	Q05924	578 aa		3.11	□□□□□ -1.91
USV1	YPL230W	MMT2	Q08970	484 aa		3.11	□□□□□ -1.91
USV1	YPL230W	YOR114W	Q12219	294 aa		3.11	□□□□□ -1.91
USV1	YPL230W	YCT1	Q12235	531 aa		3.11	□□□□□ -1.91
USV1	YPL230W	TFC7	Q12415	435 aa		3.11	□□□□□ -1.91
USV1	YPL230W	FOL3	Q12676	427 aa	Predicted RBP	3.11	□□□□□ -1.91
USV1	YPL230W	LAG2	Q92325	660 aa		3.11	□□□□□ -1.91
USV1	YPL230W	YAL064W-B	O13512	126 aa		3.1	□□□□□ -1.91
USV1	YPL230W	TPI1	P00942	248 aa	Known RBP	3.1	□□□□□ -1.91
USV1	YPL230W	CDC33	P07260	213 aa	Known RBP	3.1	□□□□□ -1.91
USV1	YPL230W	PET494	P07390	489 aa	Predicted RBP	3.1	□□□□□ -1.91
USV1	YPL230W	YBR121C-A	P0C5L4	52 aa		3.1	□□□□□ -1.91
USV1	YPL230W	STE18	P18852	110 aa		3.1	□□□□□ -1.91
USV1	YPL230W	RIB1	P38066	345 aa		3.1	□□□□□ -1.91
USV1	YPL230W	BMT2	P38278	337 aa		3.1	□□□□□ -1.91
USV1	YPL230W	URA8	P38627	578 aa	Predicted RBP	3.1	□□□□□ -1.91
USV1	YPL230W	EFM1	P38732	585 aa		3.1	□□□□□ -1.91
USV1	YPL230W	YER034W	P40022	185 aa	Known RBP	3.1	□□□□□ -1.91
USV1	YPL230W	PRE6	P40303	254 aa	Known RBP	3.1	□□□□□ -1.91
USV1	YPL230W	RFC4	P40339	323 aa	Known RBP	3.1	□□□□□ -1.91
USV1	YPL230W	NBP35	P52920	328 aa		3.1	□□□□□ -1.91
USV1	YPL230W	PEX31	P53203	462 aa		3.1	□□□□□ -1.91
USV1	YPL230W	YNR066C	P53752	436 aa		3.1	□□□□□ -1.91
USV1	YPL230W	BGL2	P15703	313 aa	Known RBP	3.09	□□□□□ -1.91
USV1	YPL230W	YPK2	P18961	677 aa		3.09	□□□□□ -1.91
USV1	YPL230W	PEX3	P28795	441 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms