RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM12	YML005W	PAM18	Q07914	168 aa		3.01	□□□□□ -1.93
TRM12	YML005W	MSH5	Q12175	901 aa		3.01	□□□□□ -1.93
TRM12	YML005W	MATALPHA1	P0CY06	175 aa		3	□□□□□ -1.93
TRM12	YML005W	HMLALPHA1	P0CY07	175 aa		3	□□□□□ -1.93
TRM12	YML005W	MRP1	P10662	321 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	PCL1	P24867	279 aa		3	□□□□□ -1.93
TRM12	YML005W	AEP1	P32493	518 aa		3	□□□□□ -1.93
TRM12	YML005W	FRM2	P37261	193 aa		3	□□□□□ -1.93
TRM12	YML005W	RFT1	P38206	574 aa	Predicted RBP	3	□□□□□ -1.93
TRM12	YML005W	PRS2	P38620	318 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	RTR1	P40084	226 aa	Predicted RBP	3	□□□□□ -1.93
TRM12	YML005W	RRG9	P40156	214 aa		3	□□□□□ -1.93
TRM12	YML005W	PRE5	P40302	234 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	SER33	P40510	469 aa		3	□□□□□ -1.93
TRM12	YML005W	HIT1	P46973	164 aa		3	□□□□□ -1.93
TRM12	YML005W	GLG2	P47011	380 aa		3	□□□□□ -1.93
TRM12	YML005W	YGL039W	P53183	348 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	CTR3	Q06686	241 aa		3	□□□□□ -1.93
TRM12	YML005W	YOL029C	Q08187	201 aa		3	□□□□□ -1.93
TRM12	YML005W	YPL278C	Q08990	100 aa		3	□□□□□ -1.93
TRM12	YML005W	TDH2	P00358	332 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	TCP1	P12612	559 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	DAL81	P21657	970 aa		3	□□□□□ -1.93
TRM12	YML005W	IFM1	P25038	676 aa		3	□□□□□ -1.93
TRM12	YML005W	SUA5	P32579	426 aa		3	□□□□□ -1.93
TRM12	YML005W	LDB7	P38210	180 aa		3	□□□□□ -1.93
TRM12	YML005W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
TRM12	YML005W	RRT13	P40042	185 aa		3	□□□□□ -1.93
TRM12	YML005W	AVT7	P40501	490 aa		3	□□□□□ -1.93
TRM12	YML005W	YGL262W	P53054	175 aa		3	□□□□□ -1.93
TRM12	YML005W	VEL1	P53058	206 aa		3	□□□□□ -1.93
TRM12	YML005W	SDT1	P53078	280 aa		3	□□□□□ -1.93
TRM12	YML005W	MAL13	P53338	473 aa		3	□□□□□ -1.93
TRM12	YML005W	YLR152C	P54072	576 aa		3	□□□□□ -1.93
TRM12	YML005W	TRM44	Q02648	567 aa	Known RBP	3	□□□□□ -1.93
TRM12	YML005W	YML018C	Q03730	393 aa		3	□□□□□ -1.93
TRM12	YML005W	VHS1	Q03785	461 aa		3	□□□□□ -1.93
TRM12	YML005W	TAF9	Q05027	157 aa		3	□□□□□ -1.93
TRM12	YML005W	FOL3	Q12676	427 aa	Predicted RBP	3	□□□□□ -1.93
TRM12	YML005W	YOL085C	Q99345	113 aa		3	□□□□□ -1.93
TRM12	YML005W	KRE6	P32486	720 aa		2.99	□□□□□ -1.93
TRM12	YML005W	DOA4	P32571	926 aa		2.99	□□□□□ -1.93
TRM12	YML005W	EFM1	P38732	585 aa		2.99	□□□□□ -1.93
TRM12	YML005W	YGR018C	P53211	109 aa		2.99	□□□□□ -1.93
TRM12	YML005W	SWS2	P53937	143 aa		2.99	□□□□□ -1.93
TRM12	YML005W	VPS60	Q03390	229 aa		2.99	□□□□□ -1.93
TRM12	YML005W	EBS1	Q03466	884 aa	Known RBP	2.99	□□□□□ -1.93
TRM12	YML005W	TSA2	Q04120	196 aa		2.99	□□□□□ -1.93
TRM12	YML005W	VIK1	Q12045	647 aa		2.99	□□□□□ -1.93
TRM12	YML005W	GIS3	Q12418	502 aa		2.99	□□□□□ -1.93
TRM12	YML005W	YAL063C-A	Q3E791	96 aa		2.99	□□□□□ -1.93
TRM12	YML005W	YAL067W-A	Q8TGK6	75 aa		2.99	□□□□□ -1.93
TRM12	YML005W	ADH1	P00330	348 aa	Known RBP	2.98	□□□□□ -1.93
TRM12	YML005W	ASP3-2	P0CX77	362 aa		2.98	□□□□□ -1.93
TRM12	YML005W	ASP3-3	P0CX78	362 aa		2.98	□□□□□ -1.93
TRM12	YML005W	ASP3-4	P0CX79	362 aa		2.98	□□□□□ -1.93
TRM12	YML005W	ASP3-1	P0CZ17	362 aa		2.98	□□□□□ -1.93
TRM12	YML005W	EPT1	P22140	391 aa		2.98	□□□□□ -1.93
TRM12	YML005W	RPS5	P26783	225 aa	Known RBP	2.98	□□□□□ -1.93
TRM12	YML005W	EHD3	P28817	500 aa		2.98	□□□□□ -1.93
TRM12	YML005W	QRI5	P32344	111 aa		2.98	□□□□□ -1.93
TRM12	YML005W	ZRT3	P34240	503 aa		2.98	□□□□□ -1.93
TRM12	YML005W	BMH2	P34730	273 aa	Known RBP	2.98	□□□□□ -1.93
TRM12	YML005W	MRX3	P38172	270 aa		2.98	□□□□□ -1.93
TRM12	YML005W	SMB1	P40018	196 aa	Known RBP	2.98	□□□□□ -1.93
TRM12	YML005W	RPL10	P41805	221 aa	Known RBP	2.98	□□□□□ -1.93
TRM12	YML005W	ASG7	P46993	209 aa		2.98	□□□□□ -1.93
TRM12	YML005W	NBP35	P52920	328 aa		2.98	□□□□□ -1.93
TRM12	YML005W	SCW10	Q04951	389 aa		2.98	□□□□□ -1.93
TRM12	YML005W	PER33	Q12144	273 aa		2.98	□□□□□ -1.93
TRM12	YML005W	ZIP1	P31111	875 aa		2.97	□□□□□ -1.93
TRM12	YML005W	NTG1	P31378	399 aa		2.97	□□□□□ -1.93
TRM12	YML005W	SPS19	P32573	292 aa	Known RBP	2.97	□□□□□ -1.93
TRM12	YML005W	UTH1	P36135	365 aa		2.97	□□□□□ -1.93
TRM12	YML005W	YIL012W	P40551	113 aa		2.97	□□□□□ -1.93
TRM12	YML005W	MSS2	P40990	351 aa		2.97	□□□□□ -1.93
TRM12	YML005W	GCN20	P43535	752 aa	Known RBP	2.97	□□□□□ -1.93
TRM12	YML005W	OTU1	P43558	301 aa		2.97	□□□□□ -1.93
TRM12	YML005W	YJR012C	P47087	207 aa		2.97	□□□□□ -1.93
TRM12	YML005W	HAL1	Q01766	294 aa		2.97	□□□□□ -1.93
TRM12	YML005W	YPL113C	Q02961	396 aa		2.97	□□□□□ -1.93
TRM12	YML005W	CWC21	Q03375	135 aa	Known RBP	2.97	□□□□□ -1.93
TRM12	YML005W	YLR283W	Q05867	314 aa		2.97	□□□□□ -1.93
TRM12	YML005W	SEC10	Q06245	871 aa		2.97	□□□□□ -1.93
TRM12	YML005W	TIR4	Q12218	487 aa	Predicted RBP	2.97	□□□□□ -1.93
TRM12	YML005W	SME1	Q12330	94 aa	Predicted RBP	2.97	□□□□□ -1.93
TRM12	YML005W	SNF8	Q12483	233 aa		2.97	□□□□□ -1.93
TRM12	YML005W	FLO11	P08640	1367 aa		2.97	□□□□□ -1.93
TRM12	YML005W	REV1	P12689	985 aa		2.96	□□□□□ -1.94
TRM12	YML005W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
TRM12	YML005W	YKT6	P36015	200 aa	Known RBP	2.96	□□□□□ -1.94
TRM12	YML005W	DBP7	P36120	742 aa	Known RBP	2.96	□□□□□ -1.94
TRM12	YML005W	YBR096W	P38256	230 aa		2.96	□□□□□ -1.94
TRM12	YML005W	SEN34	P39707	275 aa		2.96	□□□□□ -1.94
TRM12	YML005W	HOC1	P47124	396 aa		2.96	□□□□□ -1.94
TRM12	YML005W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
TRM12	YML005W	FMP41	P53889	259 aa	Known RBP	2.96	□□□□□ -1.94
TRM12	YML005W	YNL095C	P53932	642 aa		2.96	□□□□□ -1.94
TRM12	YML005W	CTF19	Q02732	369 aa		2.96	□□□□□ -1.94
TRM12	YML005W	ECM19	Q06011	112 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms