RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C NDL1Q06568 189 aa1.62□□□□□ -2.15
PRE4YFR050C LOT6Q07923 191 aa1.62□□□□□ -2.15
PRE4YFR050C GTT2Q12390 233 aa1.62□□□□□ -2.15
PRE4YFR050C NBL1Q3E7Y6 73 aa1.62□□□□□ -2.15
PRE4YFR050C YOS9Q99220 542 aa1.62□□□□□ -2.15
PRE4YFR050C CYC3P06182 269 aa1.61□□□□□ -2.15
PRE4YFR050C SSC1P0CS90 654 aaKnown RBP1.61□□□□□ -2.15
PRE4YFR050C GCG1P32656 232 aaKnown RBP1.61□□□□□ -2.15
PRE4YFR050C YME2P32843 850 aa1.61□□□□□ -2.15
PRE4YFR050C SOR1P35497 357 aaKnown RBP1.61□□□□□ -2.15
PRE4YFR050C YBR137WP38276 179 aa1.61□□□□□ -2.15
PRE4YFR050C NAB3P38996 802 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
PRE4YFR050C COS5P47187 383 aa1.61□□□□□ -2.15
PRE4YFR050C YIP5P53108 310 aa1.61□□□□□ -2.15
PRE4YFR050C HOP2P53187 214 aa1.61□□□□□ -2.15
PRE4YFR050C ACT1P60010 375 aaKnown RBP1.61□□□□□ -2.15
PRE4YFR050C OSH6Q02201 448 aa1.61□□□□□ -2.15
PRE4YFR050C BOP2Q06150 570 aa1.61□□□□□ -2.15
PRE4YFR050C NDE2Q07500 545 aa1.61□□□□□ -2.15
PRE4YFR050C SOR2Q07786 357 aa1.61□□□□□ -2.15
PRE4YFR050C COS7Q07788 383 aa1.61□□□□□ -2.15
PRE4YFR050C YLL007CQ07799 665 aa1.61□□□□□ -2.15
PRE4YFR050C GAT3Q07928 141 aa1.61□□□□□ -2.15
PRE4YFR050C SKI7Q08491 747 aaPredicted RBP1.61□□□□□ -2.15
PRE4YFR050C RNH203Q12338 110 aa1.61□□□□□ -2.15
PRE4YFR050C YOL159C-AQ3E769 90 aa1.61□□□□□ -2.15
PRE4YFR050C FSH3Q99369 266 aa1.61□□□□□ -2.15
PRE4YFR050C SOD1P00445 154 aaKnown RBP1.6□□□□□ -2.15
PRE4YFR050C SCEIP03882 235 aa1.6□□□□□ -2.15
PRE4YFR050C ARF1P11076 181 aaKnown RBP1.6□□□□□ -2.15
PRE4YFR050C PET9P18239 318 aaKnown RBP1.6□□□□□ -2.15
PRE4YFR050C UTR1P21373 530 aa1.6□□□□□ -2.15
PRE4YFR050C CTR86P25355 563 aa1.6□□□□□ -2.15
PRE4YFR050C ERG3P32353 365 aa1.6□□□□□ -2.15
PRE4YFR050C NPL6P32832 435 aa1.6□□□□□ -2.15
PRE4YFR050C JNM1P36224 373 aa1.6□□□□□ -2.15
PRE4YFR050C LDB7P38210 180 aa1.6□□□□□ -2.15
PRE4YFR050C TRS20P38334 175 aa1.6□□□□□ -2.15
PRE4YFR050C JLP2P40206 208 aa1.6□□□□□ -2.15
PRE4YFR050C SNZ3P43545 298 aa1.6□□□□□ -2.15
PRE4YFR050C MDE1P47095 244 aa1.6□□□□□ -2.15
PRE4YFR050C PMT5P52867 743 aa1.6□□□□□ -2.15
PRE4YFR050C SNZ2P53824 298 aa1.6□□□□□ -2.15
PRE4YFR050C RTC4P53850 401 aa1.6□□□□□ -2.15
PRE4YFR050C YNL247WP53852 767 aaKnown RBP1.6□□□□□ -2.15
PRE4YFR050C GPI15P53961 229 aa1.6□□□□□ -2.15
PRE4YFR050C KAP120Q02932 1032 aa1.6□□□□□ -2.15
PRE4YFR050C ENT5Q03769 411 aaKnown RBP1.6□□□□□ -2.15
PRE4YFR050C BCH1Q05029 724 aa1.6□□□□□ -2.15
PRE4YFR050C YLR297WQ05899 129 aa1.6□□□□□ -2.15
PRE4YFR050C IPK1Q06667 281 aa1.6□□□□□ -2.15
PRE4YFR050C FDH1Q08911 376 aa1.6□□□□□ -2.15
PRE4YFR050C RMD5Q12508 421 aa1.6□□□□□ -2.15
PRE4YFR050C CDC31P06704 161 aaKnown RBP1.59□□□□□ -2.15
PRE4YFR050C YHR212W-AP0CX91 67 aa1.59□□□□□ -2.15
PRE4YFR050C SPO12P17123 173 aa1.59□□□□□ -2.15
PRE4YFR050C UGA1P17649 471 aa1.59□□□□□ -2.15
PRE4YFR050C APA2P22108 325 aa1.59□□□□□ -2.15
PRE4YFR050C IMP3P32899 183 aaPredicted RBP1.59□□□□□ -2.15
PRE4YFR050C RCK1P38622 512 aa1.59□□□□□ -2.15
PRE4YFR050C RCK2P38623 610 aa1.59□□□□□ -2.15
PRE4YFR050C RFC3P38629 340 aa1.59□□□□□ -2.15
PRE4YFR050C RRP4P38792 359 aaKnown RBP1.59□□□□□ -2.15
PRE4YFR050C COX14P39103 70 aa1.59□□□□□ -2.15
PRE4YFR050C AST2P39945 430 aaKnown RBP1.59□□□□□ -2.15
PRE4YFR050C AIM10P39965 576 aaKnown RBP1.59□□□□□ -2.15
PRE4YFR050C YIL054WP40524 105 aa1.59□□□□□ -2.15
PRE4YFR050C PHO86P46956 311 aa1.59□□□□□ -2.15
PRE4YFR050C SFH5P47008 294 aa1.59□□□□□ -2.15
PRE4YFR050C YMR155WQ03795 547 aa1.59□□□□□ -2.15
PRE4YFR050C RPN9Q04062 393 aaKnown RBP1.59□□□□□ -2.15
PRE4YFR050C YMR130WQ04223 302 aa1.59□□□□□ -2.15
PRE4YFR050C DCR2Q05924 578 aa1.59□□□□□ -2.15
PRE4YFR050C PRP11Q07350 266 aaPredicted RBP1.59□□□□□ -2.15
PRE4YFR050C YDL180WQ12301 547 aa1.59□□□□□ -2.15
PRE4YFR050C YOR012WQ12351 137 aa1.59□□□□□ -2.15
PRE4YFR050C IZH2Q12442 317 aa1.59□□□□□ -2.15
PRE4YFR050C EFG1Q3E705 233 aaKnown RBP1.59□□□□□ -2.15
PRE4YFR050C HSP82P02829 709 aaKnown RBP1.58□□□□□ -2.16
PRE4YFR050C CUP2P15315 225 aa1.58□□□□□ -2.16
PRE4YFR050C TPM1P17536 199 aaKnown RBP1.58□□□□□ -2.16
PRE4YFR050C RAD57P25301 460 aa1.58□□□□□ -2.16
PRE4YFR050C YCR051WP25631 222 aa1.58□□□□□ -2.16
PRE4YFR050C MEI4P29467 408 aa1.58□□□□□ -2.16
PRE4YFR050C TPS2P31688 896 aaKnown RBP1.58□□□□□ -2.16
PRE4YFR050C NUP2P32499 720 aa1.58□□□□□ -2.16
PRE4YFR050C BYE1P36106 594 aa1.58□□□□□ -2.16
PRE4YFR050C ATP3P38077 311 aaKnown RBP1.58□□□□□ -2.16
PRE4YFR050C CHK1P38147 527 aa1.58□□□□□ -2.16
PRE4YFR050C CTR2P38865 189 aa1.58□□□□□ -2.16
PRE4YFR050C GGC1P38988 300 aa1.58□□□□□ -2.16
PRE4YFR050C DFG10P40526 253 aa1.58□□□□□ -2.16
PRE4YFR050C PAC11P40960 533 aa1.58□□□□□ -2.16
PRE4YFR050C GAB1P41733 394 aa1.58□□□□□ -2.16
PRE4YFR050C ALB1P47019 175 aaPredicted RBP1.58□□□□□ -2.16
PRE4YFR050C BRO1P48582 844 aa1.58□□□□□ -2.16
PRE4YFR050C KAP114P53067 1004 aa1.58□□□□□ -2.16
PRE4YFR050C LIP2Q06005 328 aa1.58□□□□□ -2.16
PRE4YFR050C DCS1Q06151 350 aa1.58□□□□□ -2.16
PRE4YFR050C RKM1Q08961 583 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms