RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C TDH2P00358 332 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C HOM3P10869 527 aa6.25□□□□□ -1.41
TDP1YBR223C CPR2P23285 205 aa6.25□□□□□ -1.41
TDP1YBR223C TRS65P32893 560 aa6.25□□□□□ -1.41
TDP1YBR223C SPT10P35208 640 aa6.25□□□□□ -1.41
TDP1YBR223C FMO1P38866 432 aa6.25□□□□□ -1.41
TDP1YBR223C AIM46P38885 310 aa6.25□□□□□ -1.41
TDP1YBR223C PAC1P39946 494 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C YER184CP39961 794 aa6.25□□□□□ -1.41
TDP1YBR223C HAM1P47119 197 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C YJR141WP47172 347 aaPredicted RBP6.25□□□□□ -1.41
TDP1YBR223C RSM27P53305 110 aa6.25□□□□□ -1.41
TDP1YBR223C CTF19Q02732 369 aa6.25□□□□□ -1.41
TDP1YBR223C MRX8Q05473 314 aa6.25□□□□□ -1.41
TDP1YBR223C MRPL51Q06090 140 aaPredicted RBP6.25□□□□□ -1.41
TDP1YBR223C YOL073CQ08232 322 aa6.25□□□□□ -1.41
TDP1YBR223C AVO1Q08236 1176 aa6.25□□□□□ -1.41
TDP1YBR223C AEP3Q12089 606 aa6.25□□□□□ -1.41
TDP1YBR223C PRM4Q12498 284 aa6.25□□□□□ -1.41
TDP1YBR223C PRB1P09232 635 aa6.24□□□□□ -1.41
TDP1YBR223C MXR2P25566 168 aa6.24□□□□□ -1.41
TDP1YBR223C NAB2P32505 525 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
TDP1YBR223C PAD1P33751 242 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
TDP1YBR223C CHS7P38843 316 aa6.24□□□□□ -1.41
TDP1YBR223C UTP25P40498 721 aaKnown RBP6.24□□□□□ -1.41
TDP1YBR223C NAS2P40555 220 aa6.24□□□□□ -1.41
TDP1YBR223C SCY1P53009 804 aa6.24□□□□□ -1.41
TDP1YBR223C FMP48P53233 369 aa6.24□□□□□ -1.41
TDP1YBR223C SLI1P53304 468 aa6.24□□□□□ -1.41
TDP1YBR223C CWC24P53769 259 aa6.24□□□□□ -1.41
TDP1YBR223C ERG13P54839 491 aaKnown RBP6.24□□□□□ -1.41
TDP1YBR223C TIM44Q01852 431 aa6.24□□□□□ -1.41
TDP1YBR223C COQ10Q08058 207 aa6.24□□□□□ -1.41
TDP1YBR223C ENB1Q08299 606 aa6.24□□□□□ -1.41
TDP1YBR223C YOS9Q99220 542 aa6.24□□□□□ -1.41
TDP1YBR223C FAB1P34756 2278 aa6.24□□□□□ -1.41
TDP1YBR223C RPP1AP05318 106 aaPredicted RBP6.23□□□□□ -1.41
TDP1YBR223C RPS13P05756 151 aaKnown RBP6.23□□□□□ -1.41
TDP1YBR223C YSF3P0C074 85 aaPredicted RBP6.23□□□□□ -1.41
TDP1YBR223C RPL3P14126 387 aaKnown RBP6.23□□□□□ -1.41
TDP1YBR223C CDC34P14682 295 aa6.23□□□□□ -1.41
TDP1YBR223C YCR061WP25639 631 aa6.23□□□□□ -1.41
TDP1YBR223C CAM1P29547 415 aaKnown RBP6.23□□□□□ -1.41
TDP1YBR223C MSN4P33749 630 aa6.23□□□□□ -1.41
TDP1YBR223C RPS27AP35997 82 aaKnown RBP6.23□□□□□ -1.41
TDP1YBR223C MTC4P38335 694 aaKnown RBP6.23□□□□□ -1.41
TDP1YBR223C RPS27BP38711 82 aa6.23□□□□□ -1.41
TDP1YBR223C WSC4P38739 605 aa6.23□□□□□ -1.41
TDP1YBR223C NSG1P38837 291 aa6.23□□□□□ -1.41
TDP1YBR223C SYS1P41544 203 aa6.23□□□□□ -1.41
TDP1YBR223C LYS5P50113 272 aa6.23□□□□□ -1.41
TDP1YBR223C EKI1Q03764 534 aa6.23□□□□□ -1.41
TDP1YBR223C SET6Q12529 373 aa6.23□□□□□ -1.41
TDP1YBR223C PHO2P07269 559 aa6.22□□□□□ -1.41
TDP1YBR223C DBF20P32328 564 aa6.22□□□□□ -1.41
TDP1YBR223C YBR238CP38330 731 aaKnown RBP6.22□□□□□ -1.41
TDP1YBR223C OSH7P38755 437 aa6.22□□□□□ -1.41
TDP1YBR223C YHR180WP38868 163 aa6.22□□□□□ -1.41
TDP1YBR223C YIL060WP40519 144 aa6.22□□□□□ -1.41
TDP1YBR223C YGR012WP53206 393 aa6.22□□□□□ -1.41
TDP1YBR223C MPP6P53725 186 aaPredicted RBP6.22□□□□□ -1.41
TDP1YBR223C NIS1P53939 407 aa6.22□□□□□ -1.41
TDP1YBR223C BUD25P85052 153 aa6.22□□□□□ -1.41
TDP1YBR223C PEX25Q02969 394 aa6.22□□□□□ -1.41
TDP1YBR223C STP3Q05937 343 aa6.22□□□□□ -1.41
TDP1YBR223C RLM1Q12224 676 aa6.22□□□□□ -1.41
TDP1YBR223C ORT1Q12375 292 aa6.22□□□□□ -1.41
TDP1YBR223C ODC2Q99297 307 aa6.22□□□□□ -1.41
TDP1YBR223C FUR4P05316 633 aaKnown RBP6.21□□□□□ -1.41
TDP1YBR223C DAT1P13483 248 aaKnown RBP6.21□□□□□ -1.41
TDP1YBR223C RPB8P20436 146 aa6.21□□□□□ -1.41
TDP1YBR223C CWH43P25618 953 aa6.21□□□□□ -1.41
TDP1YBR223C MRP20P32387 263 aa6.21□□□□□ -1.41
TDP1YBR223C SUA5P32579 426 aa6.21□□□□□ -1.41
TDP1YBR223C VMA8P32610 256 aaKnown RBP6.21□□□□□ -1.41
TDP1YBR223C SRP102P36057 244 aaPredicted RBP6.21□□□□□ -1.41
TDP1YBR223C ALG3P38179 458 aa6.21□□□□□ -1.41
TDP1YBR223C ARO9P38840 513 aaPredicted RBP6.21□□□□□ -1.41
TDP1YBR223C BRR6P53062 197 aa6.21□□□□□ -1.41
TDP1YBR223C GTF1P53260 183 aaPredicted RBP6.21□□□□□ -1.41
TDP1YBR223C MTM1P53320 366 aa6.21□□□□□ -1.41
TDP1YBR223C YLR460CP54007 376 aa6.21□□□□□ -1.41
TDP1YBR223C MRPL1Q04599 285 aa6.21□□□□□ -1.41
TDP1YBR223C YOR385WQ08909 290 aa6.21□□□□□ -1.41
TDP1YBR223C DAP1Q12091 152 aa6.21□□□□□ -1.41
TDP1YBR223C RTK1Q12100 620 aaPredicted RBP6.21□□□□□ -1.41
TDP1YBR223C MCP1Q12106 302 aa6.21□□□□□ -1.41
TDP1YBR223C PUT1P09368 476 aa6.21□□□□□ -1.42
TDP1YBR223C MATALPHA1P0CY06 175 aa6.21□□□□□ -1.42
TDP1YBR223C HMLALPHA1P0CY07 175 aa6.21□□□□□ -1.42
TDP1YBR223C FUS3P16892 353 aaKnown RBP6.21□□□□□ -1.42
TDP1YBR223C STE18P18852 110 aa6.21□□□□□ -1.42
TDP1YBR223C STE50P25344 346 aa6.21□□□□□ -1.42
TDP1YBR223C IMG1P25626 169 aa6.21□□□□□ -1.42
TDP1YBR223C GRE3P38715 327 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
TDP1YBR223C YNL208WP40159 199 aaKnown RBP6.21□□□□□ -1.42
TDP1YBR223C BMT5P40493 336 aa6.21□□□□□ -1.42
TDP1YBR223C AVT7P40501 490 aa6.21□□□□□ -1.42
TDP1YBR223C OTU1P43558 301 aa6.21□□□□□ -1.42
TDP1YBR223C CIN2P46670 268 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms