RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 PITHD1Q9GZP4 211 aaPredicted RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 AKIP1Q9NQ31 210 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 IFT57Q9NWB7 429 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 TRPM5Q9NZQ8 1165 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 TESQ9UGI8 421 aaKnown RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 PRKAB1Q9Y478 270 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 CHST2Q9Y4C5 530 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 COL3A1P02461 1466 aaPredicted RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 TCRBV16S1A1N1A0A5B0 115 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 GAGE12BA1L429 117 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 GAGE12HA6NDE8 117 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 NCR1O76036 304 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 APPP05067 770 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 HKR1P10072 659 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 MECP2P51608 486 aaKnown RBP4.4□□□□□ -1.71
VPS8-228ENST00000628962 KIF11P52732 1056 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 MYBPC3Q14896 1274 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 BEAN1Q3B7T3 259 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 PRAMEF9Q5VWM5 478 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 FAM83AQ86UY5 434 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 IGSF22Q8N9C0 903 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 RPGRQ92834 1020 aaKnown RBP4.4□□□□□ -1.71
VPS8-228ENST00000628962 CAVIN3Q969G5 261 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 SOX7Q9BT81 388 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 TMX1Q9H3N1 280 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 PCDH12Q9NPG4 1184 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 ING3Q9NXR8 418 aa4.4□□□□□ -1.71
VPS8-228ENST00000628962 A0A0A6YYJ9 748 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 PIPSLA2A3N6 862 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 NRP1O14786 923 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 C1RP00736 705 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 CXCR5P32302 372 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 FOXF2Q12947 444 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 ARHGAP44Q17R89 818 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 DOK3Q7L591 496 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 ANKS1AQ92625 1134 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 UIMC1Q96RL1 719 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 TUBGCP5Q96RT8 1024 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 KLHL42Q9P2K6 505 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 SYNPO2Q9UMS6 1093 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 RIMBP3CA6NJZ7 1639 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 RIMBP3BA6NNM3 1639 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 RIMBP3Q9UFD9 1639 aa4.39□□□□□ -1.71
VPS8-228ENST00000628962 MYO15BQ96JP2 1530 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 LEFTY2O00292 366 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 KRT37O76014 449 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 NDUFA10O95299 355 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 GAAP10253 952 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
VPS8-228ENST00000628962 MAN2A1Q16706 1144 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 GPRIN1Q7Z2K8 1008 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 KANSL1Q7Z3B3 1105 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 LILRB2Q8N423 598 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 JMYQ8N9B5 988 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 PPP1R14CQ8TAE6 165 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 SPATA5L1Q9BVQ7 753 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 KANSL2Q9H9L4 492 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 KDM2BQ8NHM5 1336 aa4.38□□□□□ -1.71
VPS8-228ENST00000628962 THOC2Q8NI27 1593 aaKnown RBP4.37□□□□□ -1.71
VPS8-228ENST00000628962 MYADML2A6NDP7 307 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 FSBPO95073 299 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 ZSCAN20P17040 1043 aaPredicted RBP4.37□□□□□ -1.71
VPS8-228ENST00000628962 PLA2G5P39877 138 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 WNT3AP56704 352 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 NHLH1Q02575 133 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 EPHA7Q15375 998 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 SP5Q6BEB4 398 aaPredicted RBP4.37□□□□□ -1.71
VPS8-228ENST00000628962 C16orf86Q6ZW13 317 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 FGD2Q7Z6J4 655 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 NME9Q86XW9 330 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 PLXDC1Q8IUK5 500 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 SRRM1Q8IYB3 904 aaKnown RBP4.37□□□□□ -1.71
VPS8-228ENST00000628962 PIK3C3Q8NEB9 887 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 SCARB1Q8WTV0 552 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 FEZ1Q99689 392 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 MRPL4Q9BYD3 311 aaKnown RBP4.37□□□□□ -1.71
VPS8-228ENST00000628962 EPC1Q9H2F5 836 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 TMEM260Q9NX78 707 aa4.37□□□□□ -1.71
VPS8-228ENST00000628962 CCDC163A0A0D9SF12 145 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 DIRC3C9JPN6 131 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 ALDH1A2O94788 518 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 ESRRBO95718 433 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 CYP17A1P05093 508 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 EGR2P11161 476 aaPredicted RBP4.36□□□□□ -1.71
VPS8-228ENST00000628962 CASRP41180 1078 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 GYS2P54840 703 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 BLOC1S1P78537 153 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 GUCY1B3Q02153 619 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 C2orf27AQ580R0 203 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 ABHD17BQ5VST6 288 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 KIAA0907Q7Z7F0 614 aaPredicted RBP4.36□□□□□ -1.71
VPS8-228ENST00000628962 UNC5BQ8IZJ1 945 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 CPEB3Q8NE35 698 aaKnown RBP4.36□□□□□ -1.71
VPS8-228ENST00000628962 OR5M3Q8NGP4 307 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 IL17RAQ96F46 866 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 ADAM2Q99965 735 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 TEX101Q9BY14 249 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 MTG2Q9H4K7 406 aa4.36□□□□□ -1.71
VPS8-228ENST00000628962 TRIM39Q9HCM9 518 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms