RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 MINDY3Q9H8M7 445 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 UBN1Q9NPG3 1134 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 EPS15L1Q9UBC2 864 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 CLUHO75153 1309 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 FRYLO94915 3013 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 M0R2N6 131 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 DKC1O60832 514 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD2-212ENST00000627622 CDC45O75419 566 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 EFEMP2O95967 443 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 GLUD1P00367 558 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 LMNAP02545 664 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 SRFP11831 508 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 RFX1P22670 979 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 RPS6KB1P23443 525 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 PDIA3P30101 505 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 QARSP47897 775 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 GLUD2P49448 558 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 NPEPPSP55786 919 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 CCT2P78371 535 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 KIAA0319Q5VV43 1072 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 COLGALT2Q8IYK4 626 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 BLIDQ8IZY5 108 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 SLC44A3Q8N4M1 653 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 KCNG4Q8TDN1 519 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 HDAC7Q8WUI4 952 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 PSPC1Q8WXF1 523 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 DHX33Q9H6R0 707 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 RXFP1Q9HBX9 757 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 NCOA5Q9HCD5 579 aaKnown RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 MARCH5Q9NX47 278 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 PRG3Q9Y2Y8 225 aaPredicted RBP9.7□□□□□ -0.86
CHD2-212ENST00000627622 PPME1Q9Y570 386 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 SNX14Q9Y5W7 946 aa9.7□□□□□ -0.86
CHD2-212ENST00000627622 EML1O00423 815 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 ASAP2O43150 1006 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 RFPL2O75678 378 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 PAPLNO95428 1278 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 C1RP00736 705 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 P4HBP07237 508 aaKnown RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 ITGA4P13612 1032 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 HSPA4P34932 840 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 OR1G1P47890 313 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 EVCP57679 992 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 DSG1Q02413 1049 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 SSRP1Q08945 709 aaKnown RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 LAMTOR4Q0VGL1 99 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 PPP2R5CQ13362 524 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 TRIM22Q8IYM9 498 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 SMG8Q8ND04 991 aaKnown RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 TCP11Q8WWU5 503 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 SMG7Q92540 1137 aaKnown RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 TMEM143Q96AN5 459 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 MYADMQ96S97 322 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 SLKQ9H2G2 1235 aaPredicted RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 PLEKHA4Q9H4M7 779 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 TBC1D17Q9HA65 648 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 DDX25Q9UHL0 483 aaKnown RBP9.69□□□□□ -0.86
CHD2-212ENST00000627622 CA14Q9ULX7 337 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 IPPQ9Y573 584 aa9.69□□□□□ -0.86
CHD2-212ENST00000627622 ARL5CA6NH57 179 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 GAS2O43903 313 aaKnown RBP9.68□□□□□ -0.86
CHD2-212ENST00000627622 ERLIN2O94905 339 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 SPATA31D3P0C874 917 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 MYBP10242 640 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 RFC5P40937 340 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 DSC1Q08554 894 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 PCBP1Q15365 356 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD2-212ENST00000627622 GALNT17Q6IS24 598 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 PHLDB3Q6NSJ2 640 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 SPATA31D4Q6ZUB0 917 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 SKAP1Q86WV1 359 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 RNF149Q8NC42 400 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 DAGLBQ8NCG7 672 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 ZNF707Q96C28 371 aaPredicted RBP9.68□□□□□ -0.86
CHD2-212ENST00000627622 FAM20AQ96MK3 541 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 NT5C3AQ9H0P0 336 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 PIDD1Q9HB75 910 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 CHST7Q9NS84 486 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD2-212ENST00000627622 WRAP73Q9P2S5 460 aaPredicted RBP9.68□□□□□ -0.86
CHD2-212ENST00000627622 VAV3Q9UKW4 847 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 DNAH14Q0VDD8 3507 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 SLC37A4O43826 429 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 NR1I2O75469 434 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 DEXIO95424 95 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 LAMP2P13473 410 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 PSMA5P28066 241 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 AXLP30530 894 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 NPY5RQ15761 445 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 INF2Q27J81 1249 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 NOTUMQ6P988 496 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 ZC3H14Q6PJT7 736 aaKnown RBP9.68□□□□□ -0.86
CHD2-212ENST00000627622 OTUD6AQ7L8S5 288 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 KRT25Q7Z3Z0 450 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 FERMT3Q86UX7 667 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 PALB2Q86YC2 1186 aa9.68□□□□□ -0.86
CHD2-212ENST00000627622 C4orf19Q8IY42 314 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms