RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PSMC5P62195 406 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 PLA2G4FQ68DD2 849 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 RSAD2Q8WXG1 361 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 CEP89Q96ST8 783 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 TMEM175Q9BSA9 504 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 SEMA4AQ9H3S1 761 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 CA14Q9ULX7 337 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 SSX2IPQ9Y2D8 614 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 PRG3Q9Y2Y8 225 aaPredicted RBP8.75□□□□□ -1.01
CLK1-215ENST00000621181 COL4A3BPQ9Y5P4 624 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 CNTNAP2Q9UHC6 1331 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 DNAH14Q0VDD8 3507 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 CACNA1AO00555 2505 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 INPPL1O15357 1258 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 TEX28O15482 410 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 EDIL3O43854 480 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 ERLIN2O94905 339 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 TDP2O95551 362 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 SRGAP2CP0DJJ0 459 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 OR1G1P47890 313 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 Q4G0T1 1027 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 SPECC1Q5M775 1068 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 ZC3H14Q6PJT7 736 aaKnown RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 BLOC1S2Q6QNY1 142 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 ANO5Q75V66 913 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 HSCBQ8IWL3 235 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 CMASQ8NFW8 434 aaPredicted RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 PSPC1Q8WXF1 523 aaKnown RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 RIN2Q8WYP3 895 aaPredicted RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 SMG7Q92540 1137 aaKnown RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 JAKMIP1Q96N16 626 aaKnown RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 RPS6KC1Q96S38 1066 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 TBC1D17Q9HA65 648 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 PIDD1Q9HB75 910 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 WDR6Q9NNW5 1121 aaKnown RBP8.74□□□□□ -1.01
CLK1-215ENST00000621181 SH3GLB2Q9NR46 395 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 CLUHO75153 1309 aa8.74□□□□□ -1.01
CLK1-215ENST00000621181 LILRB3O75022 631 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 CDC45O75419 566 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 RFPL2O75678 378 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 STBD1O95210 358 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 SRFP11831 508 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 IFNAR1P17181 557 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 GLUD2P49448 558 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 NTRK3Q16288 839 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 CYP26C1Q6V0L0 522 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 SRGAP1Q7Z6B7 1085 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 EXOC8Q8IYI6 725 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 TRIM22Q8IYM9 498 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 KIAA2013Q8IYS2 634 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 SLC44A3Q8N4M1 653 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 NXPE3Q969Y0 559 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 TMEM143Q96AN5 459 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 CEP170P1Q96L14 293 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 UBN1Q9NPG3 1134 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 EPS15L1Q9UBC2 864 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 R4GN57 208 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 NID2Q14112 1375 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 DOCK8Q8NF50 2099 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 DKC1O60832 514 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLK1-215ENST00000621181 NR1I2O75469 434 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 DCNP07585 359 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 SPATA31D3P0C874 917 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 ITGA4P13612 1032 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 HOXA11P31270 313 aaPredicted RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 MLH1P40692 756 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 QARSP47897 775 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 NPEPPSP55786 919 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 CCT2P78371 535 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 B3GNT9Q6UX72 402 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 SPATA31D4Q6ZUB0 917 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 GET4Q7L5D6 327 aaPredicted RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 TAS1R1Q7RTX1 841 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 DGLUCYQ7Z3D6 616 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 MRPL10Q7Z7H8 261 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 COLGALT2Q8IYK4 626 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 RNF149Q8NC42 400 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 CNNM3Q8NE01 707 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 ETNPPLQ8TBG4 499 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 GPR152Q8TDT2 470 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 PRPF31Q8WWY3 499 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 RMDN1Q96DB5 314 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 HERC2P3Q9BVR0 1158 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 MINDY3Q9H8M7 445 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 MARCH5Q9NX47 278 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLK1-215ENST00000621181 DDX25Q9UHL0 483 aaKnown RBP8.73□□□□□ -1.01
CLK1-215ENST00000621181 PCDHA4Q9UN74 947 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 SIT1Q9Y3P8 196 aa8.73□□□□□ -1.01
CLK1-215ENST00000621181 CACNA1IQ9P0X4 2223 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 CEP250Q9BV73 2442 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 OTOGLQ3ZCN5 2332 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 ARL5CA6NH57 179 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms