RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 KIFAP3Q92845 792 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 MAP7D2Q96T17 732 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 GZF1Q9H116 711 aaPredicted RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 RNF216Q9NWF9 866 aaPredicted RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 CNTN3Q9P232 1028 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 RCOR1Q9UKL0 485 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 ODF2LQ9ULJ1 636 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 NOL7Q9UMY1 257 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 COG5Q9UP83 839 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 AKT3Q9Y243 479 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 MYO16Q9Y6X6 1858 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 ANAPC1Q9H1A4 1944 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SCN1AP35498 2009 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 BMP15O95972 392 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 GALTP07902 379 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SKIP12755 728 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 KCNE1P15382 129 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 IGFBP6P24592 240 aaPredicted RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 MRPS27Q92552 414 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 FAM161BQ96MY7 647 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 INO80BQ9C086 356 aaPredicted RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 FOXD4L1Q9NU39 408 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 GIT1Q9Y2X7 761 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 TCF20Q9UGU0 1960 aaKnown RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 C2orf71A6NGG8 1288 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 ARL5CA6NH57 179 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 ZBBXA8MT70 800 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 LOC730098B7Z3J9 87 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 MRPL58Q14197 206 aaKnown RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 FEZF2Q8TBJ5 459 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 DACT1Q9NYF0 836 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 GRXCR2A6NFK2 248 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 HIP1RO75146 1068 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 PLS3P13797 630 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 FOSBP53539 338 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 DLX2Q07687 328 aaPredicted RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 GPM6BQ13491 265 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 RESP18Q5W5W9 173 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 ATL3Q6DD88 541 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 SLC27A1Q6PCB7 646 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 CRELD2Q6UXH1 353 aaPredicted RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 DTHD1Q6ZMT9 781 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 MYOCDQ8IZQ8 938 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 METTL13Q8N6R0 699 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 RNF149Q8NC42 400 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 ARNTL2Q8WYA1 636 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 BHMT2Q9H2M3 363 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 NSUN3Q9H649 340 aaKnown RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 PRMT7Q9NVM4 692 aaPredicted RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 DNAJB4Q9UDY4 337 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 PCDHB7Q9Y5E2 793 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 M0QZ92 97 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 HOXA2O43364 376 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 YEATS4O95619 227 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 LAG3P18627 525 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 CSPP1Q1MSJ5 1256 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 TCEAL5Q5H9L2 206 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 EEF1DP3Q658K8 133 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 LILRA6Q6PI73 481 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 SMRP1Q8NCR6 262 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 CNNM3Q8NE01 707 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 IGSF21Q96ID5 467 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 C11orf84Q9BUA3 381 aaPredicted RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 UBN1Q9NPG3 1134 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 C11orf16Q9NQ32 467 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 TRIOO75962 3097 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 USP34Q70CQ2 3546 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 DOCK8Q8NF50 2099 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 LINC01565O15544 149 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 KLRC4O43908 158 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 FGF18O76093 207 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 F13A1P00488 732 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 ZSCAN22P10073 491 aaPredicted RBP6.28□□□□□ -1.4
FMR1-217ENST00000620828 GRM5P41594 1212 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 SLC11A1P49279 550 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 BCAR1P56945 870 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 FAM184AQ8NB25 1140 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 HELQQ8TDG4 1101 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 NLRP7Q8WX94 980 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 CPB2Q96IY4 423 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 EPSTI1Q96J88 318 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 SNX27Q96L92 541 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 FGFBP2Q9BYJ0 223 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 CD320Q9NPF0 282 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
FMR1-217ENST00000620828 FSD2A1L4K1 749 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 PLA2G4BP0C869 781 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 PLCG1P19174 1290 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 PDCP20941 246 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 TIGD5Q53EQ6 642 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 KCNT2Q6UVM3 1135 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 LPPQ93052 612 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CDCA3Q99618 268 aaPredicted RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 REEP2Q9BRK0 252 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 NT5C3AQ9H0P0 336 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 C2orf40Q9H1Z8 148 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms