RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 TMOD2Q9NZR1 351 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 SRRM3A6NNA2 597 aaPredicted RBP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 PYGMP11217 842 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 RFX1P22670 979 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 PTGIRP43119 386 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 RPL21P46778 160 aaKnown RBP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 SLC29A2Q14542 456 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 EPC2Q52LR7 807 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 CPLX4Q7Z7G2 160 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 XXYLT1Q8NBI6 393 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 SEC16BQ96JE7 1060 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 CABS1Q96KC9 395 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 RIT2Q99578 217 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 ZSWIM1Q9BR11 485 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.38
C11orf54-215ENST00000617482 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 VCPKMTQ9H867 229 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 COL20A1Q9P218 1284 aa12.71□□□□□ -0.38
C11orf54-215ENST00000617482 SYNGAP1Q96PV0 1343 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 MIF4GDA9UHW6 222 aaKnown RBP12.7□□□□□ -0.38
C11orf54-215ENST00000617482 NFIBO00712 420 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 SLC16A4O15374 487 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 PHF2O75151 1096 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 RTN2O75298 545 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 APBA3O96018 575 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CHRNB2P17787 502 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 DENND2CQ68D51 928 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC137Q6PK04 289 aaKnown RBP12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC121Q6ZUS5 278 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 NEK9Q8TD19 979 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 POP1Q99575 1024 aaKnown RBP12.7□□□□□ -0.38
C11orf54-215ENST00000617482 TMEM117Q9H0C3 514 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 GRHL1Q9NZI5 618 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 RASAL2Q9UJF2 1139 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CCPG1Q9ULG6 757 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 PPIP5K2O43314 1243 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 MMEP08473 750 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 PLS3P13797 630 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CHRNA3P32297 505 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 KCNJ1P48048 391 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 RARRES1P49788 294 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 PEX5P50542 639 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 MNAT1P51948 309 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 PEX3P56589 373 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 ACTN3Q08043 901 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-215ENST00000617482 MYBPC2Q14324 1141 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 C11orf63Q6NUN7 778 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC13Q8IYE1 715 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 TLCD1Q96CP7 247 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 VEZTQ9HBM0 779 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
C11orf54-215ENST00000617482 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 DHX15O43143 795 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 ATP2C2O75185 946 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 MXI1P50539 228 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 HADHBP55084 474 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 IFI35P80217 286 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SPRED3Q2MJR0 410 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 NSMFQ6X4W1 530 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 HOOK3Q86VS8 718 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SUGP1Q8IWZ8 645 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC105Q8IYK2 499 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 CPXCR1Q8N123 301 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SELENOSQ9BQE4 189 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 AZI2Q9H6S1 392 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 GGA2Q9UJY4 613 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 RPTORQ8N122 1335 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 GOLGA6L7A0A1B0GV03 622 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SPOPO43791 374 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 RAD17O75943 681 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 ADRB2P07550 413 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 FGFR4P22455 802 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 CTNNA2P26232 953 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 QARSP47897 775 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 DRG2P55039 364 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SPP2Q13103 211 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 BYSLQ13895 437 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 RASA3Q14644 834 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SEL1L2Q5TEA6 688 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 CBWD2Q8IUF1 395 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms