RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 CDK5RAP3Q96JB5 506 aa21.29■■□□□ 1
TCF3-219ENST00000610756 DRC1Q96MC2 740 aa21.29■■□□□ 1
TCF3-219ENST00000610756 NTPCRQ9BSD7 190 aaKnown RBP21.29■■□□□ 1
TCF3-219ENST00000610756 RUSC1Q9BVN2 902 aa21.29■■□□□ 1
TCF3-219ENST00000610756 ZSCAN16Q9H4T2 348 aaPredicted RBP21.29■■□□□ 1
TCF3-219ENST00000610756 TLE6Q9H808 572 aa21.29■■□□□ 1
TCF3-219ENST00000610756 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
TCF3-219ENST00000610756 KCNG1Q9UIX4 513 aa21.29■■□□□ 1
TCF3-219ENST00000610756 PCDHGC5Q9Y5F6 944 aa21.29■■□□□ 1
TCF3-219ENST00000610756 ARL5CA6NH57 179 aa21.29■■□□□ 1
TCF3-219ENST00000610756 H3BQ06 376 aaPredicted RBP21.29■■□□□ 1
TCF3-219ENST00000610756 STX6O43752 255 aa21.29■■□□□ 1
TCF3-219ENST00000610756 DDHD2O94830 711 aa21.29■■□□□ 1
TCF3-219ENST00000610756 PRKCBP05771 671 aa21.29■■□□□ 1
TCF3-219ENST00000610756 NRIP1P48552 1158 aa21.29■■□□□ 1
TCF3-219ENST00000610756 TMEM119Q4V9L6 283 aa21.29■■□□□ 1
TCF3-219ENST00000610756 RBM23Q86U06 439 aaKnown RBP21.29■■□□□ 1
TCF3-219ENST00000610756 CDR2LQ86X02 465 aaPredicted RBP21.29■■□□□ 1
TCF3-219ENST00000610756 TMEM169Q96HH4 297 aa21.29■■□□□ 1
TCF3-219ENST00000610756 IGSF21Q96ID5 467 aa21.29■■□□□ 1
TCF3-219ENST00000610756 CDCA3Q99618 268 aaPredicted RBP21.29■■□□□ 1
TCF3-219ENST00000610756 TCF25Q9BQ70 676 aa21.29■■□□□ 1
TCF3-219ENST00000610756 KCND2Q9NZV8 630 aa21.29■■□□□ 1
TCF3-219ENST00000610756 DNAJB4Q9UDY4 337 aa21.29■■□□□ 1
TCF3-219ENST00000610756 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
TCF3-219ENST00000610756 CLIC4Q9Y696 253 aa21.29■■□□□ 1
TCF3-219ENST00000610756 KIAA1671Q9BY89 1806 aa21.28■■□□□ 1
TCF3-219ENST00000610756 FSD2A1L4K1 749 aa21.28■■□□□ 1
TCF3-219ENST00000610756 GRXCR2A6NFK2 248 aa21.28■■□□□ 1
TCF3-219ENST00000610756 TTLL13PA6NNM8 815 aa21.28■■□□□ 1
TCF3-219ENST00000610756 K7ERI5 159 aa21.28■■□□□ 1
TCF3-219ENST00000610756 TNFRSF10AO00220 468 aa21.28■■□□□ 1
TCF3-219ENST00000610756 N4BP3O15049 544 aa21.28■■□□□ 1
TCF3-219ENST00000610756 HIP1RO75146 1068 aa21.28■■□□□ 1
TCF3-219ENST00000610756 NPTXRO95502 500 aa21.28■■□□□ 1
TCF3-219ENST00000610756 POMCP01189 267 aa21.28■■□□□ 1
TCF3-219ENST00000610756 PLA2G4BP0C869 781 aa21.28■■□□□ 1
TCF3-219ENST00000610756 NPTX2P47972 431 aa21.28■■□□□ 1
TCF3-219ENST00000610756 SLC12A3P55017 1021 aa21.28■■□□□ 1
TCF3-219ENST00000610756 PEX3P56589 373 aa21.28■■□□□ 1
TCF3-219ENST00000610756 DLX2Q07687 328 aaPredicted RBP21.28■■□□□ 1
TCF3-219ENST00000610756 PTPAQ15257 358 aa21.28■■□□□ 1
TCF3-219ENST00000610756 PTCRAQ6ISU1 281 aaPredicted RBP21.28■■□□□ 1
TCF3-219ENST00000610756 TMC7Q7Z402 723 aa21.28■■□□□ 1
TCF3-219ENST00000610756 MRPL43Q8N983 215 aaKnown RBP21.28■■□□□ 1
TCF3-219ENST00000610756 CALML4Q96GE6 196 aa21.28■■□□□ 1
TCF3-219ENST00000610756 FAM193BQ96PV7 902 aaPredicted RBP21.28■■□□□ 1
TCF3-219ENST00000610756 GAD1Q99259 594 aa21.28■■□□□ 1
TCF3-219ENST00000610756 PLIN2Q99541 437 aa21.28■■□□□ 1
TCF3-219ENST00000610756 TMEM175Q9BSA9 504 aa21.28■■□□□ 1
TCF3-219ENST00000610756 GBP3Q9H0R5 595 aa21.28■■□□□ 1
TCF3-219ENST00000610756 NXF3Q9H4D5 531 aaKnown RBP21.28■■□□□ 1
TCF3-219ENST00000610756 PDZD7Q9H5P4 517 aa21.28■■□□□ 1
TCF3-219ENST00000610756 LINC01565O15544 149 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 PDIA4P13667 645 aaKnown RBP21.27■□□□□ 0.99
TCF3-219ENST00000610756 SLC11A1P49279 550 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 GRIN1Q05586 938 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 MAPK7Q13164 816 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 DDX53Q86TM3 631 aaKnown RBP21.27■□□□□ 0.99
TCF3-219ENST00000610756 TMEM173Q86WV6 379 aaPredicted RBP21.27■□□□□ 0.99
TCF3-219ENST00000610756 KIFC3Q9BVG8 833 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 TMEM134Q9H6X4 195 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 ENTPD7Q9NQZ7 604 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 MIOSQ9NXC5 875 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 STK39Q9UEW8 545 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 FAN1Q9Y2M0 1017 aa21.27■□□□□ 0.99
TCF3-219ENST00000610756 CCDC169A6NNP5 214 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 PER2O15055 1255 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 B4GALT3O60512 393 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 SSBP05455 408 aaKnown RBP eCLIP21.26■□□□□ 0.99
TCF3-219ENST00000610756 AKAP5P24588 427 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 MLH1P40692 756 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 DMP1Q13316 513 aaPredicted RBP21.26■□□□□ 0.99
TCF3-219ENST00000610756 BMS1Q14692 1282 aaKnown RBP21.26■□□□□ 0.99
TCF3-219ENST00000610756 DUSP6Q16828 381 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 PLPP4Q5VZY2 271 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 FAM173BQ6P4H8 233 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 HSCBQ8IWL3 235 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 GSTCDQ8NEC7 633 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 ZFP42Q96MM3 310 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 ADPGKQ9BRR6 497 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 CCSER1Q9C0I3 900 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 FAM50BQ9Y247 325 aa21.26■□□□□ 0.99
TCF3-219ENST00000610756 SRPRBQ9Y5M8 271 aaKnown RBP21.26■□□□□ 0.99
TCF3-219ENST00000610756 MORC2Q9Y6X9 1032 aaPredicted RBP21.26■□□□□ 0.99
TCF3-219ENST00000610756 ZMYM2Q9UBW7 1377 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 PHLPP2Q6ZVD8 1323 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 SFI1A8K8P3 1242 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 HIDE1A8MVS5 230 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 NRP1O14786 923 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 TBX10O75333 385 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 CXCL14O95715 111 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 EDN1P05305 212 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 DSC1Q08554 894 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 SMC1AQ14683 1233 aaKnown RBP21.25■□□□□ 0.99
TCF3-219ENST00000610756 TMEM132AQ24JP5 1023 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 ARSHQ5FYA8 562 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 NT5DC1Q5TFE4 455 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 TMEM184AQ6ZMB5 413 aa21.25■□□□□ 0.99
TCF3-219ENST00000610756 COLGALT2Q8IYK4 626 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms