RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 NPTXRO95502 500 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 KRT18P05783 430 aaKnown RBP18.08■□□□□ 0.48
DNMT1-229ENST00000593049 LIG1P18858 919 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 ABCD1P33897 745 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 ALDH7A1P49419 539 aaKnown RBP18.08■□□□□ 0.48
DNMT1-229ENST00000593049 RAD51AP2Q09MP3 1159 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
DNMT1-229ENST00000593049 DCAF4L1Q3SXM0 396 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 ARSHQ5FYA8 562 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 KCNT2Q6UVM3 1135 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 LRRC55Q6ZSA7 311 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 USP49Q70CQ1 688 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 SMG8Q8ND04 991 aaKnown RBP18.08■□□□□ 0.48
DNMT1-229ENST00000593049 SPPL3Q8TCT6 385 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 PPP2R3CQ969Q6 453 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 KIFC3Q9BVG8 833 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 MRPL4Q9BYD3 311 aaKnown RBP18.08■□□□□ 0.48
DNMT1-229ENST00000593049 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
DNMT1-229ENST00000593049 LZTS1Q9Y250 596 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 INPP5FQ9Y2H2 1132 aa18.08■□□□□ 0.48
DNMT1-229ENST00000593049 GRM6O15303 877 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 INPPL1O15357 1258 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 TBCAO75347 108 aaKnown RBP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 FGF18O76093 207 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 FAM13AO94988 1023 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 ITGB1P05556 798 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 STAT6P42226 847 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 PLCB3Q01970 1234 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 KRT17Q04695 432 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 STRN3Q13033 797 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 SKIV2LQ15477 1246 aaKnown RBP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 LONRF3Q496Y0 759 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 ATF7IP2Q5U623 682 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 PDE12Q6L8Q7 609 aaKnown RBP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 FAM193BQ96PV7 902 aaPredicted RBP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 PDZD7Q9H5P4 517 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 NSUN3Q9H649 340 aaKnown RBP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 ALG13Q9NP73 1137 aaKnown RBP18.07■□□□□ 0.48
DNMT1-229ENST00000593049 TBC1D13Q9NVG8 400 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 SPG21Q9NZD8 308 aa18.07■□□□□ 0.48
DNMT1-229ENST00000593049 MEIS3P2A8K0S8 358 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 SFI1A8K8P3 1242 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 SLC16A4O15374 487 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 NCK2O43639 380 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 ZNF131P52739 623 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 GIT2Q14161 759 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
DNMT1-229ENST00000593049 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
DNMT1-229ENST00000593049 TMEM161BQ8NDZ6 487 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 KCNN1Q92952 543 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 NXF3Q9H4D5 531 aaKnown RBP18.06■□□□□ 0.48
DNMT1-229ENST00000593049 THEGQ9P2T0 379 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 STK39Q9UEW8 545 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 COG5Q9UP83 839 aa18.06■□□□□ 0.48
DNMT1-229ENST00000593049 NPHP3-ACAD11A0A0J9YXS1 232 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 ARL5CA6NH57 179 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 ZC3H11AO75152 810 aaKnown RBP eCLIP18.05■□□□□ 0.48
DNMT1-229ENST00000593049 ME1P48163 572 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 BCAR1P56945 870 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 KRT85P78386 507 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 DNM1Q05193 864 aaKnown RBP18.05■□□□□ 0.48
DNMT1-229ENST00000593049 BMS1Q14692 1282 aaKnown RBP18.05■□□□□ 0.48
DNMT1-229ENST00000593049 NT5DC1Q5TFE4 455 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 CDR2LQ86X02 465 aaPredicted RBP18.05■□□□□ 0.48
DNMT1-229ENST00000593049 MYCT1Q8N699 235 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 LRRC15Q8TF66 581 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 POF1BQ8WVV4 589 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 MRPS27Q92552 414 aaKnown RBP18.05■□□□□ 0.48
DNMT1-229ENST00000593049 ACO2Q99798 780 aaKnown RBP18.05■□□□□ 0.48
DNMT1-229ENST00000593049 LRRC27Q9C0I9 530 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 CUEDC2Q9H467 287 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 HCSTQ9UBK5 93 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 PARP2Q9UGN5 583 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 RCOR1Q9UKL0 485 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 TNFSF13BQ9Y275 285 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 PLXNA4Q9HCM2 1894 aa18.05■□□□□ 0.48
DNMT1-229ENST00000593049 NCKAP1LP55160 1127 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 AAK1Q2M2I8 961 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 SLC39A11Q8N1S5 342 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 TMEM169Q96HH4 297 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 RPS6KC1Q96S38 1066 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 GAD1Q99259 594 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 PYM1Q9BRP8 204 aaKnown RBP18.04■□□□□ 0.48
DNMT1-229ENST00000593049 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 APOL6Q9BWW8 343 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 NRDE2Q9H7Z3 1164 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 TLR9Q9NR96 1032 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 FAM13BQ9NYF5 915 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 SEL1LQ9UBV2 794 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 HES2Q9Y543 173 aa18.04■□□□□ 0.48
DNMT1-229ENST00000593049 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
DNMT1-229ENST00000593049 TTLL13PA6NNM8 815 aa18.03■□□□□ 0.48
DNMT1-229ENST00000593049 NR1I2O75469 434 aa18.03■□□□□ 0.48
DNMT1-229ENST00000593049 MAPTP10636 758 aaKnown RBP18.03■□□□□ 0.48
DNMT1-229ENST00000593049 MLH1P40692 756 aa18.03■□□□□ 0.48
DNMT1-229ENST00000593049 NUCB2P80303 420 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms