RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FAM117BQ6P1L5 589 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 SLC27A1Q6PCB7 646 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 TMCO2Q7Z6W1 182 aaPredicted RBP21.01■□□□□ 0.95
DDX39A-214ENST00000590556 ECHDC2Q86YB7 292 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 NPAS4Q8IUM7 802 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 HERC6Q8IVU3 1022 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 TOP1MTQ969P6 601 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 ACCSQ96QU6 501 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 SLC39A2Q9NP94 309 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 FAM105AQ9NUU6 356 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 LRFN2Q9ULH4 789 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 PCDHB7Q9Y5E2 793 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 PCDHB2Q9Y5E7 798 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 TRIOBPQ9H2D6 2365 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 PTPRSQ13332 1948 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 NPTXRO95502 500 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 L1TD1Q5T7N2 865 aaKnown RBP21■□□□□ 0.95
DDX39A-214ENST00000590556 EEF1DP3Q658K8 133 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 ZPBP2Q6X784 338 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 APBB1IPQ7Z5R6 666 aaPredicted RBP21■□□□□ 0.95
DDX39A-214ENST00000590556 MAP4K3Q8IVH8 894 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 RNF169Q8NCN4 708 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 GLIS3Q8NEA6 775 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
DDX39A-214ENST00000590556 SMARCE1Q969G3 411 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 ADPGKQ9BRR6 497 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 ZBED2Q9BTP6 218 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 EIF2AQ9BY44 585 aaKnown RBP21■□□□□ 0.95
DDX39A-214ENST00000590556 TRIM6Q9C030 488 aaPredicted RBP21■□□□□ 0.95
DDX39A-214ENST00000590556 ELAC1Q9H777 363 aaKnown RBP21■□□□□ 0.95
DDX39A-214ENST00000590556 EXOC7Q9UPT5 735 aa21■□□□□ 0.95
DDX39A-214ENST00000590556 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-214ENST00000590556 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-214ENST00000590556 HNRNPDLO14979 420 aaKnown RBP20.99■□□□□ 0.95
DDX39A-214ENST00000590556 EIF3DO15371 548 aaKnown RBP eCLIP20.99■□□□□ 0.95
DDX39A-214ENST00000590556 PRPF6O94906 941 aaKnown RBP20.99■□□□□ 0.95
DDX39A-214ENST00000590556 RHOBTB3O94955 611 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 LIG4P49917 911 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 KCNB1Q14721 858 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 CAMK4Q16566 473 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 FAM109BQ6ICB4 259 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-214ENST00000590556 GPT2Q8TD30 523 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 GSDMAQ96QA5 445 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 TCHPQ9BT92 498 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 RMND1Q9NWS8 449 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 TMEM161AQ9NX61 479 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 PCDHA5Q9Y5H7 936 aa20.99■□□□□ 0.95
DDX39A-214ENST00000590556 RANBP2P49792 3224 aaKnown RBP20.98■□□□□ 0.95
DDX39A-214ENST00000590556 GRXCR1A8MXD5 290 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 ZNF623O75123 536 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 TOM1L1O75674 476 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 GJB5O95377 273 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 EOMESO95936 686 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 MBD3O95983 291 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 PIGRP01833 764 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 KCNA1Q09470 495 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 STK4Q13043 487 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 DCAF4L1Q3SXM0 396 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 ZNF568Q3ZCX4 644 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 EPM2AIP1Q7L775 607 aaPredicted RBP20.98■□□□□ 0.95
DDX39A-214ENST00000590556 SYCP3Q8IZU3 236 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 CRIPAKQ8N1N5 446 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 PGBD4Q96DM1 585 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 CLSTN2Q9H4D0 955 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 PTPRHQ9HD43 1115 aa20.98■□□□□ 0.95
DDX39A-214ENST00000590556 PROZP22891 400 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 MATR3P43243 847 aaKnown RBP eCLIP20.97■□□□□ 0.95
DDX39A-214ENST00000590556 RABGGTBP53611 331 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 MPZL3Q6UWV2 235 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 MRPL10Q7Z7H8 261 aaKnown RBP20.97■□□□□ 0.95
DDX39A-214ENST00000590556 ZBTB33Q86T24 672 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 ZNF598Q86UK7 904 aaKnown RBP20.97■□□□□ 0.95
DDX39A-214ENST00000590556 HACE1Q8IYU2 909 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 SMG8Q8ND04 991 aaKnown RBP20.97■□□□□ 0.95
DDX39A-214ENST00000590556 SPATA20Q8TB22 786 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 ZNF507Q8TCN5 953 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 ZBTB45Q96K62 511 aaPredicted RBP20.97■□□□□ 0.95
DDX39A-214ENST00000590556 TMEM206Q9H813 350 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 ANKFY1Q9P2R3 1169 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 IPPQ9Y573 584 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 UBE4BO95155 1302 aa20.97■□□□□ 0.95
DDX39A-214ENST00000590556 CLDN3O15551 220 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 TLL1O43897 1013 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 MCF2P10911 925 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 ITGA4P13612 1032 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 ATF7P17544 494 aaPredicted RBP20.96■□□□□ 0.95
DDX39A-214ENST00000590556 LRIT3Q3SXY7 679 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 KIAA0895Q8NCT3 520 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 SCFD1Q8WVM8 642 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 LPPQ93052 612 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 YME1L1Q96TA2 773 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 RAD9AQ99638 391 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 NUP62CLQ9H1M0 184 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 CDT1Q9H211 546 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 HES2Q9Y543 173 aa20.96■□□□□ 0.95
DDX39A-214ENST00000590556 ANKRD63C9JTQ0 380 aa20.95■□□□□ 0.94
DDX39A-214ENST00000590556 ABLIM1O14639 778 aa20.95■□□□□ 0.94
DDX39A-214ENST00000590556 HOXA2O43364 376 aa20.95■□□□□ 0.94
DDX39A-214ENST00000590556 FGFR1P11362 822 aa20.95■□□□□ 0.94
DDX39A-214ENST00000590556 HARSP12081 509 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms