RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 GTF2BQ00403 316 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 RAB30Q15771 203 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 ZC2HC1CQ53FD0 456 aaPredicted RBP17.04■□□□□ 0.32
GHDC-209ENST00000588762 FAM26FQ5R3K3 315 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 FAM109BQ6ICB4 259 aaPredicted RBP17.04■□□□□ 0.32
GHDC-209ENST00000588762 ZPBP2Q6X784 338 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 HACE1Q8IYU2 909 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 ACO2Q99798 780 aaKnown RBP17.04■□□□□ 0.32
GHDC-209ENST00000588762 PDZD7Q9H5P4 517 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 MSRAQ9UJ68 235 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 USP20Q9Y2K6 914 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 LAMA2P24043 3122 aaKnown RBP17.04■□□□□ 0.32
GHDC-209ENST00000588762 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 ZNF623O75123 536 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 SMC2O95347 1197 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 NPTXRO95502 500 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 EDN1P05305 212 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 PRR29P0C7W0 189 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 DPYDQ12882 1025 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 PSMD2Q13200 908 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 CDR2LQ86X02 465 aaPredicted RBP17.03■□□□□ 0.32
GHDC-209ENST00000588762 ACCSQ96QU6 501 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 YME1L1Q96TA2 773 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 RAD9AQ99638 391 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 TCHPQ9BT92 498 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 TARS2Q9BW92 718 aaKnown RBP17.03■□□□□ 0.32
GHDC-209ENST00000588762 EIF2AQ9BY44 585 aaKnown RBP17.03■□□□□ 0.32
GHDC-209ENST00000588762 EXOC7Q9UPT5 735 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 INSL6Q9Y581 213 aa17.03■□□□□ 0.32
GHDC-209ENST00000588762 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.32
GHDC-209ENST00000588762 HOXA2O43364 376 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 KLRC4O43908 158 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 MYBP10242 640 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.32
GHDC-209ENST00000588762 LIG4P49917 911 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 RABGGTBP53611 331 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 PNOCQ13519 176 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 DCAF4L1Q3SXM0 396 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 ZNF568Q3ZCX4 644 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 KMT5BQ4FZB7 885 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
GHDC-209ENST00000588762 L1TD1Q5T7N2 865 aaKnown RBP17.02■□□□□ 0.32
GHDC-209ENST00000588762 MAP4K3Q8IVH8 894 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.32
GHDC-209ENST00000588762 ABI1Q8IZP0 508 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 SYCP3Q8IZU3 236 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 CRIPAKQ8N1N5 446 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 HPS3Q969F9 1004 aa17.02■□□□□ 0.32
GHDC-209ENST00000588762 CITO14578 2027 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 TOM1L1O75674 476 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 PPP1R37O75864 691 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 DGKIO75912 1065 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 ITGA4P13612 1032 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 CASP5P51878 434 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
GHDC-209ENST00000588762 EHHADHQ08426 723 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 EEF1DP3Q658K8 133 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
GHDC-209ENST00000588762 ZNF598Q86UK7 904 aaKnown RBP17.01■□□□□ 0.31
GHDC-209ENST00000588762 STRA6Q9BX79 667 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 PBX4Q9BYU1 374 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 RMND1Q9NWS8 449 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 ANKFY1Q9P2R3 1169 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 IPPQ9Y573 584 aa17.01■□□□□ 0.31
GHDC-209ENST00000588762 TDRD15B5MCY1 1934 aaKnown RBP17■□□□□ 0.31
GHDC-209ENST00000588762 EIF3DO15371 548 aaKnown RBP eCLIP17■□□□□ 0.31
GHDC-209ENST00000588762 CLDN3O15551 220 aa17■□□□□ 0.31
GHDC-209ENST00000588762 PIGRP01833 764 aa17■□□□□ 0.31
GHDC-209ENST00000588762 FGFR1P11362 822 aa17■□□□□ 0.31
GHDC-209ENST00000588762 ATF7P17544 494 aaPredicted RBP17■□□□□ 0.31
GHDC-209ENST00000588762 DNAJB2P25686 324 aa17■□□□□ 0.31
GHDC-209ENST00000588762 KCNB1Q14721 858 aa17■□□□□ 0.31
GHDC-209ENST00000588762 ZBTB33Q86T24 672 aa17■□□□□ 0.31
GHDC-209ENST00000588762 NLRC5Q86WI3 1866 aa17■□□□□ 0.31
GHDC-209ENST00000588762 SMG8Q8ND04 991 aaKnown RBP17■□□□□ 0.31
GHDC-209ENST00000588762 SMARCE1Q969G3 411 aa17■□□□□ 0.31
GHDC-209ENST00000588762 APOL6Q9BWW8 343 aa17■□□□□ 0.31
GHDC-209ENST00000588762 FGFBP2Q9BYJ0 223 aa17■□□□□ 0.31
GHDC-209ENST00000588762 TMEM206Q9H813 350 aa17■□□□□ 0.31
GHDC-209ENST00000588762 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
GHDC-209ENST00000588762 UBN1Q9NPG3 1134 aa17■□□□□ 0.31
GHDC-209ENST00000588762 TRIP11Q15643 1979 aa17■□□□□ 0.31
GHDC-209ENST00000588762 UBE4BO95155 1302 aa16.99■□□□□ 0.31
GHDC-209ENST00000588762 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
GHDC-209ENST00000588762 RHOBTB3O94955 611 aa16.99■□□□□ 0.31
GHDC-209ENST00000588762 MCF2P10911 925 aa16.99■□□□□ 0.31
GHDC-209ENST00000588762 HARSP12081 509 aaKnown RBP16.99■□□□□ 0.31
GHDC-209ENST00000588762 PROZP22891 400 aa16.99■□□□□ 0.31
GHDC-209ENST00000588762 PBX2P40425 430 aa16.99■□□□□ 0.31
GHDC-209ENST00000588762 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
GHDC-209ENST00000588762 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
GHDC-209ENST00000588762 SLFN12LQ6IEE8 588 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms