RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.69■□□□□ 0.42
RETREG3-206ENST00000588423 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 ZNF558Q96NG5 402 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 ADPGKQ9BRR6 497 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 PDZD7Q9H5P4 517 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
RETREG3-206ENST00000588423 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 GIT1Q9Y2X7 761 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 TTLL13PA6NNM8 815 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 SFI1A8K8P3 1242 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 H0YCG3 227 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 CUTAO60888 179 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 FGF18O76093 207 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 NPTXRO95502 500 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 ZNF131P52739 623 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 RAD51AP2Q09MP3 1159 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 LONRF3Q496Y0 759 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 CCDC73Q6ZRK6 1079 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 THNSL1Q8IYQ7 743 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 POF1BQ8WVV4 589 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 REEP2Q9BRK0 252 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 NSUN3Q9H649 340 aaKnown RBP17.68■□□□□ 0.42
RETREG3-206ENST00000588423 TBC1D13Q9NVG8 400 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 COG5Q9UP83 839 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 TNFSF13BQ9Y275 285 aa17.68■□□□□ 0.42
RETREG3-206ENST00000588423 NPHP3-ACAD11A0A0J9YXS1 232 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 EDN1P05305 212 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 ALDH7A1P49419 539 aaKnown RBP17.67■□□□□ 0.42
RETREG3-206ENST00000588423 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 BCAR1P56945 870 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
RETREG3-206ENST00000588423 CAMK1Q14012 370 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 GIT2Q14161 759 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 TMEM132AQ24JP5 1023 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 DCAF4L1Q3SXM0 396 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 NT5DC1Q5TFE4 455 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 TAS1R3Q7RTX0 852 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 APBB1IPQ7Z5R6 666 aaPredicted RBP17.67■□□□□ 0.42
RETREG3-206ENST00000588423 CDR2LQ86X02 465 aaPredicted RBP17.67■□□□□ 0.42
RETREG3-206ENST00000588423 TMEM161BQ8NDZ6 487 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 MRPL4Q9BYD3 311 aaKnown RBP17.67■□□□□ 0.42
RETREG3-206ENST00000588423 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 NXF3Q9H4D5 531 aaKnown RBP17.67■□□□□ 0.42
RETREG3-206ENST00000588423 NRDE2Q9H7Z3 1164 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 SPG21Q9NZD8 308 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 THEGQ9P2T0 379 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 INPP5FQ9Y2H2 1132 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 HES2Q9Y543 173 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 EYSQ5T1H1 3165 aa17.67■□□□□ 0.42
RETREG3-206ENST00000588423 ARL5CA6NH57 179 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 SLC16A4O15374 487 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 LIG1P18858 919 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 DNAJB1P25685 340 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 KRT17Q04695 432 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 DHX8Q14562 1220 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 PDE12Q6L8Q7 609 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 SLC39A11Q8N1S5 342 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 ATXN2LQ8WWM7 1075 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 ACO2Q99798 780 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 TMEM175Q9BSA9 504 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 PARVGQ9HBI0 331 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 PUF60Q9UHX1 559 aaKnown RBP17.66■□□□□ 0.42
RETREG3-206ENST00000588423 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
RETREG3-206ENST00000588423 NCK2O43639 380 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 ZC3H11AO75152 810 aaKnown RBP eCLIP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 FAM13AO94988 1023 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 MAPTP10636 758 aaKnown RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 ABCD1P33897 745 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 MLH1P40692 756 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 STAT6P42226 847 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 AFF1P51825 1210 aaKnown RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 STRN3Q13033 797 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 SKIV2LQ15477 1246 aaKnown RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 FOXD4L6Q3SYB3 417 aaPredicted RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 TCEAL5Q5H9L2 206 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 AXDND1Q5T1B0 1012 aaPredicted RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 FOXD4L3Q6VB84 417 aaPredicted RBP17.65■□□□□ 0.42
RETREG3-206ENST00000588423 SV2BQ7L1I2 683 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 PPP2R3CQ969Q6 453 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 GAD1Q99259 594 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 PTPRHQ9HD43 1115 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 PRDM6Q9NQX0 595 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 TLR9Q9NR96 1032 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 RCOR1Q9UKL0 485 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 ATP6V1DQ9Y5K8 247 aa17.65■□□□□ 0.42
RETREG3-206ENST00000588423 A0A087X0B3 334 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.41
RETREG3-206ENST00000588423 GALTP07902 379 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 PROZP22891 400 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 AKAP5P24588 427 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 COL19A1Q14993 1142 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 EEF1DP3Q658K8 133 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 ZNF280BQ86YH2 543 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 MYCT1Q8N699 235 aa17.64■□□□□ 0.41
RETREG3-206ENST00000588423 HLA-CQ95604 372 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms