RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CAPSLQ8WWF8 208 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 CENPTQ96BT3 561 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 SETDB2Q96T68 719 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 SYCE1LA8MT33 242 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 STAM2O75886 525 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 NFKBIAP25963 317 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 HPS1Q92902 700 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 C12orf4Q9NQ89 552 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 IARS2Q9NSE4 1012 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM17Q9Y577 477 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ENTPD5O75356 428 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 PARNO95453 639 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 SARSP49591 514 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ALDH5A1P51649 535 aaPredicted RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 LRRC63Q05C16 580 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 TCIRG1Q13488 830 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 SYTL1Q8IYJ3 562 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM11Q96F44 468 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 CARD8Q9Y2G2 431 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 SYNRGQ9UMZ2 1314 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 DDX39AO00148 427 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 KRT16P08779 473 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 MAP1BP46821 2468 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 PDK3Q15120 406 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 TMC5Q6UXY8 1006 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 TBATAQ96M53 351 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ACCSQ96QU6 501 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 STK39Q9UEW8 545 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 IVNS1ABPQ9Y6Y0 642 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF263O14978 683 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 CBX6O95503 412 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 OR52Z1P0C646 297 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 TAC1P20366 129 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RPS8P62241 208 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 SPOPLQ6IQ16 392 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ERICH1Q86X53 443 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ADSSL1Q8N142 457 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 NUP85Q9BW27 656 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 IMPG2Q9BZV3 1241 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 E9PMD0 336 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 EIF4A1P60842 406 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 STX1BP61266 288 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RIPK1Q13546 671 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 AOC3Q16853 763 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 CNBD1Q8NA66 436 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 PYGBP11216 843 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 UBE3AQ05086 875 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ARHGEF19Q8IW93 802 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 FAM71DQ8N9W8 422 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 C20orf96Q9NUD7 363 aaPredicted RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 ZC3H7BQ9UGR2 993 aaKnown RBP3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RGS21Q2M5E4 152 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 RXFP1Q9HBX9 757 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 PCDHA1Q9Y5I3 950 aa3.9□□□□□ -1.78
ATXN3-248ENST00000558190 PPM1KQ8N3J5 372 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 RBM41Q96IZ5 413 aaKnown RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 MAGEB18Q96M61 343 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 KLHL31Q9H511 634 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ABHD10Q9NUJ1 306 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 PNMA3Q9UL41 463 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 FKBP9O95302 570 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ITGA4P13612 1032 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ITGA9Q13797 1035 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 FKBP9P1Q75LS8 142 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CITED4Q96RK1 184 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 M0R2C6 588 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 KLK7P49862 253 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 MIS18BP1Q6P0N0 1132 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 AHI1Q8N157 1196 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 RIN3Q8TB24 985 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 OSCP1Q8WVF1 389 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 NT5C1BQ96P26 610 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SHCBP1LQ9BZQ2 653 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SEL1LQ9UBV2 794 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 GSC2O15499 205 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 GRIK3Q13003 919 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 KLC3Q6P597 504 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SEMA6AQ9H2E6 1030 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 GDF3Q9NR23 364 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 RINT1Q6NUQ1 792 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 OSBPL6Q9BZF3 934 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 S100A9P06702 114 aaKnown RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 FHDC1Q9C0D6 1143 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SMYD2Q9NRG4 433 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 INTS13Q9NVM9 706 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CHORDC1Q9UHD1 332 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SORBS3O60504 671 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 DSG1Q02413 1049 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 MAPK6Q16659 721 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 COBLL1Q53SF7 1204 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 HAUS3Q68CZ6 603 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 IGDCC4Q8TDY8 1250 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 PLEKHA5Q9HAU0 1116 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SNX13Q9Y5W8 968 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CDH16O75309 829 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 POLR2BP30876 1174 aaKnown RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CPXCR1Q8N123 301 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 C17orf50Q8WW18 174 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 RBM15Q96T37 977 aaKnown RBP eCLIP3.9□□□□□ -1.793e-6■■■■□ 24.3
ATXN3-248ENST00000558190 TMEM79Q9BSE2 394 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms