RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 JAM2P57087 298 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 TUBB4BP68371 445 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 CBWD6Q4V339 395 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 CBWD3Q5JTY5 395 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 CBWD5Q5RIA9 395 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 PLPPR4Q7Z2D5 763 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 CEP112Q8N8E3 955 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 ANKRD7Q92527 254 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 TSC1Q92574 1164 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 USP6NLQ92738 828 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 PCYT2Q99447 389 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 GPR20Q99678 358 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 APBA2Q99767 749 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 JPH2Q9BR39 696 aaPredicted RBP18.29■□□□□ 0.52
LDLR-206ENST00000557958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.29■□□□□ 0.52
LDLR-206ENST00000557958 STK33Q9BYT3 514 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 TRIM10Q9UDY6 481 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 EMSYQ7Z589 1322 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 LGR5O75473 907 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 LIG4P49917 911 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 MCCD1P59942 119 aaPredicted RBP18.29■□□□□ 0.52
LDLR-206ENST00000557958 GFPT1Q06210 699 aaPredicted RBP18.29■□□□□ 0.52
LDLR-206ENST00000557958 TARBP2Q15633 366 aaKnown RBP18.29■□□□□ 0.52
LDLR-206ENST00000557958 TMC2Q8TDI7 906 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 TCP11Q8WWU5 503 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 UBXN4Q92575 508 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 CARD6Q9BX69 1037 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 LACRTQ9GZZ8 138 aa18.29■□□□□ 0.52
LDLR-206ENST00000557958 PJA2O43164 708 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 GFPT2O94808 682 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 ABL1P00519 1130 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 MARK3P27448 753 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 ARL2P36404 184 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 FLT3LGP49771 235 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 MXI1P50539 228 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 WHAMMP3Q1A5X7 153 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 IQCEQ6IPM2 695 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 KATNBL1Q9H079 304 aa18.28■□□□□ 0.52
LDLR-206ENST00000557958 MACROD2A1Z1Q3 448 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 LRRIQ4A6NIV6 560 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 ANKRD63C9JTQ0 380 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 MAFO75444 373 aaPredicted RBP18.27■□□□□ 0.52
LDLR-206ENST00000557958 GH1P01241 217 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 HOXC6P09630 235 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 SMPD1P17405 629 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 ADSSP30520 456 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 GTF2H1P32780 548 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 PRKCZQ05513 592 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 SLFN12LQ6IEE8 588 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 IRF2BP2Q7Z5L9 587 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 GPD1LQ8N335 351 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 RNF10Q8N5U6 811 aaKnown RBP18.27■□□□□ 0.52
LDLR-206ENST00000557958 MSL3Q8N5Y2 521 aaKnown RBP18.27■□□□□ 0.52
LDLR-206ENST00000557958 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 FBXL18Q96ME1 805 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 SMARCAD1Q9H4L7 1026 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 DNAJC12Q9UKB3 198 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 ADGRA3Q8IWK6 1321 aa18.27■□□□□ 0.52
LDLR-206ENST00000557958 RCCD1A6NED2 376 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 K7ERI5 159 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 SOX5P35711 763 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 TNFAIP2Q03169 654 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 LAMC2Q13753 1193 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 TRIM50Q86XT4 487 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 DOCK3Q8IZD9 2030 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 CD99L2Q8TCZ2 262 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 ATP8B3O60423 1300 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 F8VZ95 297 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 GLRA2P23416 452 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 EFNA5P52803 228 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 CAP1Q01518 475 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 PTK2Q05397 1052 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 ARHGAP1Q07960 439 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 ENOX2Q16206 610 aaKnown RBP18.26■□□□□ 0.51
LDLR-206ENST00000557958 IER5Q5VY09 327 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 IQSEC1Q6DN90 963 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 CBWD2Q8IUF1 395 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 AFG1LQ8WV93 481 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 SAAL1Q96ER3 474 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 NOX5Q96PH1 765 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 TMEM134Q9H6X4 195 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 ADAMTS1Q9UHI8 967 aa18.26■□□□□ 0.51
LDLR-206ENST00000557958 PCNTO95613 3336 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 RBM47A0AV96 593 aaKnown RBP18.25■□□□□ 0.51
LDLR-206ENST00000557958 GOLGA8IPA6NC78 632 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 GOLGA8JA6NMD2 632 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 TADA3O75528 432 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 PIGRP01833 764 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 GCLMP48507 274 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 DLG4P78352 724 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 MXD4Q14582 209 aaPredicted RBP18.25■□□□□ 0.51
LDLR-206ENST00000557958 OLFML2BQ68BL8 750 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 KRT39Q6A163 491 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 OR6J1Q8NGC5 347 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 ASAP3Q8TDY4 903 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 LENG1Q96BZ8 264 aaPredicted RBP18.25■□□□□ 0.51
LDLR-206ENST00000557958 MFSD14AQ96MC6 490 aa18.25■□□□□ 0.51
LDLR-206ENST00000557958 TMEM8AQ9HCN3 771 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms