RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ASAP2O43150 1006 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 NR1I2O75469 434 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 RFPL2O75678 378 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 PAPLNO95428 1278 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 EFEMP2O95967 443 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 RFC5P40937 340 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 DSG1Q02413 1049 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 LAMTOR4Q0VGL1 99 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 PCBP1Q15365 356 aaKnown RBP eCLIP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 ZC3H14Q6PJT7 736 aaKnown RBP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 TCP11Q8WWU5 503 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 ZNF707Q96C28 371 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 DHX33Q9H6R0 707 aaKnown RBP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 MINDY3Q9H8M7 445 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 PIDD1Q9HB75 910 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 DDX25Q9UHL0 483 aaKnown RBP13.28□□□□□ -0.28
ACTN1-221ENST00000556571 SIT1Q9Y3P8 196 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 R4GN57 208 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 GPR179Q6PRD1 2367 aa13.28□□□□□ -0.28
ACTN1-221ENST00000556571 ARL5CA6NH57 179 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 EML1O00423 815 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 CDC45O75419 566 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 ERLIN2O94905 339 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 P4HBP07237 508 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 MYBP10242 640 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 LAMP2P13473 410 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 AXLP30530 894 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 EVCP57679 992 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 DSC1Q08554 894 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 NCBP1Q09161 790 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 GALNT17Q6IS24 598 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 DGLUCYQ7Z3D6 616 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 GPR65Q8IYL9 337 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 BLIDQ8IZY5 108 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 RNF149Q8NC42 400 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 GPR152Q8TDT2 470 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 RIN2Q8WYP3 895 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 CCDC51Q96ER9 411 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 FAM20AQ96MK3 541 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 NCOA5Q9HCD5 579 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 ARHGEF3Q9NR81 526 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 CHST7Q9NS84 486 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 ZDHHC7Q9NXF8 308 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 IPPQ9Y573 584 aa13.27□□□□□ -0.29
ACTN1-221ENST00000556571 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
ACTN1-221ENST00000556571 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 M0R2N6 131 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 TGM5O43548 720 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 DCNP07585 359 aaKnown RBP13.26□□□□□ -0.29
ACTN1-221ENST00000556571 SPATA31D3P0C874 917 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 PSMA5P28066 241 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 HSPA4P34932 840 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
ACTN1-221ENST00000556571 SPECC1Q5M775 1068 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 SPATA31D4Q6ZUB0 917 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-221ENST00000556571 OTUD6AQ7L8S5 288 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 FERMT3Q86UX7 667 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 PALB2Q86YC2 1186 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 C1orf210Q8IVY1 113 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 KIAA2013Q8IYS2 634 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 DAGLBQ8NCG7 672 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 GAD1Q99259 594 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 PRKD2Q9BZL6 878 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 DLGAP2Q9P1A6 1054 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 FNIP2Q9P278 1114 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 SNX14Q9Y5W7 946 aa13.26□□□□□ -0.29
ACTN1-221ENST00000556571 ZFP37Q9Y6Q3 630 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-221ENST00000556571 C2orf16Q68DN1 1984 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 DEXIO95424 95 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 SP9P0CG40 484 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 MLH1P40692 756 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 CREMQ03060 361 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 HTR4Q13639 388 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 PUM1Q14671 1186 aaKnown RBP eCLIP13.25□□□□□ -0.29
ACTN1-221ENST00000556571 INF2Q27J81 1249 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 NOTUMQ6P988 496 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 LILRA6Q6PI73 481 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 DCLRE1AQ6PJP8 1040 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 KRT25Q7Z3Z0 450 aa13.25□□□□□ -0.29
ACTN1-221ENST00000556571 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms