RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DDX23Q9BUQ8 820 aaKnown RBP18.52■□□□□ 0.56
PTPN21-208ENST00000556564 KLK14Q9P0G3 267 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 PCDHAC2Q9Y5I4 1007 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 PALMO75781 387 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTPN21-208ENST00000556564 ANGPTL3Q9Y5C1 460 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 SNRNP35Q16560 246 aaKnown RBP18.52■□□□□ 0.56
PTPN21-208ENST00000556564 MCUQ8NE86 351 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 TTC1Q99614 292 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 EPB41L5Q9HCM4 733 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 GPRC5DQ9NZD1 345 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 C2CD2LO14523 706 aa18.52■□□□□ 0.55
PTPN21-208ENST00000556564 TRPA1O75762 1119 aa18.52■□□□□ 0.55
PTPN21-208ENST00000556564 ALDH1A1P00352 501 aa18.52■□□□□ 0.55
PTPN21-208ENST00000556564 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.55
PTPN21-208ENST00000556564 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.55
PTPN21-208ENST00000556564 DPF2Q92785 391 aa18.52■□□□□ 0.55
PTPN21-208ENST00000556564 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.55
PTPN21-208ENST00000556564 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.55
PTPN21-208ENST00000556564 PRRG1O14668 218 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 VTNP04004 478 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 PAN2Q504Q3 1202 aaKnown RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 MYRIPQ8NFW9 859 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 CYP26A1O43174 497 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 LY6KQ17RY6 165 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 C7orf25Q9BPX7 421 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 STAP1Q9ULZ2 295 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 NOC2LQ9Y3T9 749 aaKnown RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 DCDC2CA8MYV0 355 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 MYLK4Q86YV6 388 aaPredicted RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 CC2D1AQ6P1N0 951 aaPredicted RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 NOTUMQ6P988 496 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 SDCCAG8Q86SQ7 713 aaPredicted RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 ASCC2Q9H1I8 757 aaPredicted RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 CDC23Q9UJX2 597 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 ADCY1Q08828 1119 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 KCNB1Q14721 858 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 ARID5BQ14865 1188 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 ZNF564Q8TBZ8 553 aaPredicted RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
PTPN21-208ENST00000556564 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
PTPN21-208ENST00000556564 DHX40Q8IX18 779 aaKnown RBP18.5■□□□□ 0.55
PTPN21-208ENST00000556564 FAF2Q96CS3 445 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 KLHL8Q9P2G9 620 aaPredicted RBP18.5■□□□□ 0.55
PTPN21-208ENST00000556564 TJP3O95049 919 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 FTLP02792 175 aaPredicted RBP18.5■□□□□ 0.55
PTPN21-208ENST00000556564 ARRDC4Q8NCT1 418 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 HDAC11Q96DB2 347 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 HMBSP08397 361 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 IRF1P10914 325 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 RGS7P49802 495 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 KRT33BQ14525 404 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 STARD7Q9NQZ5 370 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 KCND2Q9NZV8 630 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 TRIM17Q9Y577 477 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 NDUFAB1O14561 156 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 NCOA4Q13772 614 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 CCDC62Q6P9F0 684 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 BZW1Q7L1Q6 419 aaKnown RBP18.5■□□□□ 0.55
PTPN21-208ENST00000556564 IFT43Q96FT9 208 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 NEMP1O14524 444 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 CXCL11O14625 94 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 TEX33O43247 280 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 SRGAP2O75044 1071 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 FXR2P51116 673 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTPN21-208ENST00000556564 ATP11AP98196 1134 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 DPYDQ12882 1025 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 TTC39CQ8N584 583 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 KIAA1683Q9H0B3 1180 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 CACYBPQ9HB71 228 aaKnown RBP18.5■□□□□ 0.55
PTPN21-208ENST00000556564 FAM114A2Q9NRY5 505 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 OGFRQ9NZT2 677 aa18.5■□□□□ 0.55
PTPN21-208ENST00000556564 CLGNO14967 610 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 GRIK5Q16478 980 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 JRKLQ9Y4A0 524 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 APOEP02649 317 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 RPA1P27694 616 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 SOX5P35711 763 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 FKBP1AP62942 108 aaKnown RBP18.49■□□□□ 0.55
PTPN21-208ENST00000556564 NDUFAF2Q8N183 169 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 DEPDC1BQ8WUY9 529 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 PRMT7Q9NVM4 692 aaPredicted RBP18.49■□□□□ 0.55
PTPN21-208ENST00000556564 DNAJC17Q9NVM6 304 aaKnown RBP18.49■□□□□ 0.55
PTPN21-208ENST00000556564 SLC16A3O15427 465 aaKnown RBP18.49■□□□□ 0.55
PTPN21-208ENST00000556564 CLCN3P51790 818 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 RNF25Q96BH1 459 aaPredicted RBP18.49■□□□□ 0.55
PTPN21-208ENST00000556564 VWA5AO00534 786 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
PTPN21-208ENST00000556564 NNMTP40261 264 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 SEZ6Q53EL9 994 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 TTC30BQ8N4P2 665 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 BPIFA3Q9BQP9 254 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 PMLP29590 882 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 USP49Q70CQ1 688 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 TRPM4Q8TD43 1214 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 EFCC1Q9HA90 598 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 SLC38A7Q9NVC3 462 aa18.49■□□□□ 0.55
PTPN21-208ENST00000556564 SUPT20HL2P0C7V6 817 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 ADORA2AP29274 412 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms