RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CAVIN3Q969G5 261 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 ACSF2Q96CM8 615 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 CCT8L2Q96SF2 557 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 TMEM117Q9H0C3 514 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 KCNK9Q9NPC2 374 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 DBR1Q9UK59 544 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 PPP1R37O75864 691 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 CNGA1P29973 690 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 CXCL9Q07325 125 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 ZNF844Q08AG5 666 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 SEPT14Q6ZU15 432 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 FNBP1Q96RU3 617 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 PCDHB18PQ96TA0 734 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 ANAPC7Q9UJX3 599 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 CAND2O75155 1236 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 PYGMP11217 842 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 PPP2R5CQ13362 524 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 C10orf76Q5T2E6 689 aa14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 CCDC137Q6PK04 289 aaKnown RBP14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 INTS8Q75QN2 995 aaKnown RBP14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 ZNF564Q8TBZ8 553 aaPredicted RBP14.71□□□□□ -0.05
PRPF40B-209ENST00000548825 SBF2Q86WG5 1849 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 CTNND1O60716 968 aaKnown RBP14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 CD58P19256 250 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 MARK3P27448 753 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 JAM2P57087 298 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 DENND2CQ68D51 928 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 SNRNP48Q6IEG0 339 aaKnown RBP14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 CABS1Q96KC9 395 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 AZI2Q9H6S1 392 aa14.71□□□□□ -0.06
PRPF40B-209ENST00000548825 FRMPD4Q14CM0 1322 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 ANKRD62A6NC57 917 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 TULP2O00295 520 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 PDE6CP51160 858 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 GPC5P78333 572 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 MAPK7Q13164 816 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 SLC29A2Q14542 456 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 JAMLQ86YT9 394 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 SCFD2Q8WU76 684 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 FIZ1Q96SL8 496 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 SEMA4AQ9H3S1 761 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 RNF146Q9NTX7 359 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 CNOT8Q9UFF9 292 aaKnown RBP14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 FEM1BQ9UK73 627 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 GRIN2DO15399 1336 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 MYH11P35749 1972 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 EIF3DO15371 548 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 MDH1P40925 334 aaKnown RBP14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 GSTA5Q7RTV2 222 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 ZBTB33Q86T24 672 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 TADA2BQ86TJ2 420 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 NLRP14Q86W24 1093 aa14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 SUCLA2Q9P2R7 463 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-209ENST00000548825 PI4K2BG5E9Z4 385 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 PRKCIP41743 596 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ITIH3Q06033 890 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ZKSCAN8Q15776 578 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 NBPF12Q5TAG4 269 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ACTRT1Q8TDG2 376 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 EPS8L3Q8TE67 593 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ZNF473Q8WTR7 871 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 PPM1EQ8WY54 764 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 C11orf70Q9BRQ4 267 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 TRPC6Q9Y210 931 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 TMEM253P0C7T8 217 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 PLS3P13797 630 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 MAGEA9P43362 315 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 NPTX2P47972 431 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 CORO7P57737 925 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 SETQ01105 290 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 PLCB3Q01970 1234 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 TRAF1Q13077 416 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 NT5C1BQ96P26 610 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 RAB17Q9H0T7 212 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 RANBP17Q9H2T7 1088 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 RGS16O15492 202 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ONECUT3O60422 494 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 CCNE2O96020 404 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 LIG4P49917 911 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 IFI35P80217 286 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 CUL1Q13616 776 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 MCTP2Q6DN12 878 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 DPY19L2P1Q6NXN4 242 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 SCARA5Q6ZMJ2 495 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 FAM160B2Q86V87 743 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 FLAD1Q8NFF5 587 aa14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ZBTB45Q96K62 511 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-209ENST00000548825 ZBED4O75132 1171 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 MAPK4P31152 587 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 LONRF1Q17RB8 773 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 CYP4F22Q6NT55 531 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 RUFY4Q6ZNE9 571 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 WRNIP1Q96S55 665 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 GPR88Q9GZN0 384 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 TMEM206Q9H813 350 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 RASAL2Q9UJF2 1139 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 ODF2LQ9ULJ1 636 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms