RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 LZTS1Q9Y250 596 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CNTNAP2Q9UHC6 1331 aa10.77□□□□□ -0.69
TNFRSF1A-214ENST00000543048 A0A1B0GUA9 196 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MEIS3P2A8K0S8 358 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 K7ELQ4 463 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ITGA4P13612 1032 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ARF4P18085 180 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SYT1P21579 422 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KCNA5P22460 613 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 IRS1P35568 1242 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PPM1AP35813 382 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 BCAR1P56945 870 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ERVFC1P60507 584 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HYAL1Q12794 435 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ADAM15Q13444 863 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZRSR1Q15695 479 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PUS10Q3MIT2 529 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HYIQ5T013 277 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 EP400NLQ6ZTU2 488 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DEPTORQ8TB45 409 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 URGCPQ8TCY9 931 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KIFAP3Q92845 792 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SNX21Q969T3 373 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 EIF2AQ9BY44 585 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NRDE2Q9H7Z3 1164 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TLE6Q9H808 572 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 RSAD1Q9HA92 442 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 POLD4Q9HCU8 107 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TLR9Q9NR96 1032 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CLDND1Q9NY35 253 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DAXXQ9UER7 740 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 INPP5FQ9Y2H2 1132 aa10.76□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CITO14578 2027 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NT5C1B-RDH14C9J2C7 533 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ACKR2O00590 384 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FSCN2O14926 492 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SLC26A4O43511 780 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CSPG5O95196 566 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ALDH2P05091 517 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GALTP07902 379 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NUDT7P0C024 238 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 LTBRP36941 435 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NAMPTP43490 491 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MAPK6Q16659 721 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CDCA2Q69YH5 1023 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 RINT1Q6NUQ1 792 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SLC27A1Q6PCB7 646 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 C1orf186Q6ZWK4 172 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HACE1Q8IYU2 909 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SLC39A11Q8N1S5 342 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 BSNDQ8WZ55 320 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CDK5RAP3Q96JB5 506 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 AK8Q96MA6 479 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PNMA5Q96PV4 448 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FAM193BQ96PV7 902 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 UHRF1Q96T88 793 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TRIM6Q9C030 488 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NT5C3AQ9H0P0 336 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NGRNQ9NPE2 291 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TBC1D13Q9NVG8 400 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 IPPQ9Y573 584 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MYH15Q9Y2K3 1946 aa10.75□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MTCL1Q9Y4B5 1905 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 H3BQ06 376 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 K7ERI5 159 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TNFRSF10AO00220 468 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 B4GALT5O43286 388 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NPTXRO95502 500 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.691e-6■■■■□ 22.9
TNFRSF1A-214ENST00000543048 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ANP32AP39687 249 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PBX3P40426 434 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 UBA7P41226 1012 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NRIP1P48552 1158 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 EFNA5P52803 228 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PRPF4BQ13523 1007 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SF3A1Q15459 793 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMC7Q7Z402 723 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KCNK18Q7Z418 384 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ADGRD2Q7Z7M1 963 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CABP7Q86V35 215 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZNF280BQ86YH2 543 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 EFHBQ8N7U6 833 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SYT2Q8N9I0 419 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms