RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ACCSQ96QU6 501 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 PCDHB18PQ96TA0 734 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 GINM1Q9NU53 330 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 USP20Q9Y2K6 914 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 GJA3Q9Y6H8 435 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 NCANO14594 1321 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 HPDP32754 393 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 KIF22Q14807 665 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 UBLCP1Q8WVY7 318 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 KRT35Q92764 455 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 SEMA4DQ92854 862 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 ZKSCAN4Q969J2 545 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 RMDN3Q96TC7 470 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 TMEM117Q9H0C3 514 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 CTTNBP2NLQ9P2B4 639 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 INTUQ9ULD6 942 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 DOCK5Q9H7D0 1870 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 KIAA1217Q5T5P2 1943 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 ZBED4O75132 1171 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 HSPA9P38646 679 aaKnown RBP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 EPC2Q52LR7 807 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 XXYLT1Q8NBI6 393 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 GLG1Q92896 1179 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
C11orf54-214ENST00000540113 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
C11orf54-214ENST00000540113 ZNF541Q9H0D2 1346 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.42
C11orf54-214ENST00000540113 CYP26A1O43174 497 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 ANXA13P27216 316 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 ADSSP30520 456 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 BAATQ14032 418 aaPredicted RBP12.44□□□□□ -0.42
C11orf54-214ENST00000540113 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
C11orf54-214ENST00000540113 NOP9Q86U38 636 aaKnown RBP12.44□□□□□ -0.42
C11orf54-214ENST00000540113 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 SCYL3Q8IZE3 742 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 MREGQ8N565 214 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 BSNDQ8WZ55 320 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 TMEM206Q9H813 350 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 ZNF112Q9UJU3 913 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
C11orf54-214ENST00000540113 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 FZD9O00144 591 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 PTPRAP18433 802 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 BACE1P56817 501 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 MESDQ14696 234 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 DHX38Q92620 1227 aaKnown RBP12.43□□□□□ -0.42
C11orf54-214ENST00000540113 CALR3Q96L12 384 aaKnown RBP12.43□□□□□ -0.42
C11orf54-214ENST00000540113 KREMEN1Q96MU8 473 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 TCEAL9Q9UHQ7 104 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
C11orf54-214ENST00000540113 ALG6Q9Y672 507 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 LCTP09848 1927 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 MMEP08473 750 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 MAPTP10636 758 aaKnown RBP12.43□□□□□ -0.42
C11orf54-214ENST00000540113 CHRNB2P17787 502 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 CTNNA1P35221 906 aaKnown RBP12.43□□□□□ -0.42
C11orf54-214ENST00000540113 MXI1P50539 228 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 ARHGEF16Q5VV41 709 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 PHLDB2Q86SQ0 1253 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 C4orf19Q8IY42 314 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 WRNIP1Q96S55 665 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 ATP8B3O60423 1300 aa12.43□□□□□ -0.42
C11orf54-214ENST00000540113 SSC5DA1L4H1 1573 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 CCDC188H7C350 402 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 NR1D1P20393 614 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 SEC24CP53992 1094 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 GTF2BQ00403 316 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 MYBPC2Q14324 1141 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 ANO5Q75V66 913 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 ATP6V1G3Q96LB4 118 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 PI4K2AQ9BTU6 479 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 TCRBV7S2A1N4TA0A589 114 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 WDR64B1ANS9 1081 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 H0YGN5 161 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 NPTX2P47972 431 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 HMGCS2P54868 508 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 PSMC5P62195 406 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 SKOR1P84550 965 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
C11orf54-214ENST00000540113 DHX9Q08211 1270 aaKnown RBP12.42□□□□□ -0.42
C11orf54-214ENST00000540113 CUL1Q13616 776 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 SNRNP35Q16560 246 aaKnown RBP12.42□□□□□ -0.42
C11orf54-214ENST00000540113 UBAP2Q5T6F2 1119 aaKnown RBP12.42□□□□□ -0.42
C11orf54-214ENST00000540113 ANGEL2Q5VTE6 544 aaKnown RBP12.42□□□□□ -0.42
C11orf54-214ENST00000540113 LMBRD2Q68DH5 695 aaPredicted RBP12.42□□□□□ -0.42
C11orf54-214ENST00000540113 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 ZDHHC14Q8IZN3 488 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 C18orf8Q96DM3 657 aa12.42□□□□□ -0.42
C11orf54-214ENST00000540113 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms