RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 PDGFBP01127 241 aaPredicted RBP11.93□□□□□ -0.5
C11orf54-209ENST00000530620 WEE2P0C1S8 567 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 RAB27AP51159 221 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 USP46P62068 366 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 CDC42EP1Q00587 391 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 PPP2R5CQ13362 524 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 NOMO2Q5JPE7 1267 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 GLB1LQ6UWU2 654 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 CATSPER4Q7RTX7 472 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 FAM177A1Q8N128 213 aaPredicted RBP11.93□□□□□ -0.5
C11orf54-209ENST00000530620 VPS52Q8N1B4 723 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 FEZF2Q8TBJ5 459 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 VN1R3Q9BXE9 311 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 INO80BQ9C086 356 aaPredicted RBP11.93□□□□□ -0.5
C11orf54-209ENST00000530620 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 IFT122Q9HBG6 1241 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 GJB4Q9NTQ9 266 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 AGPAT5Q9NUQ2 364 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 DNAJB4Q9UDY4 337 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 COL4A3BPQ9Y5P4 624 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
C11orf54-209ENST00000530620 DOCK8Q8NF50 2099 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 CCDC194A0A1B0GVG4 234 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 CXCL14O95715 111 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 SKIP12755 728 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 EPCAMP16422 314 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 QARSP47897 775 aaKnown RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 SLC11A1P49279 550 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 RNASELQ05823 741 aaKnown RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 ITIH3Q06033 890 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 SCRN1Q12765 414 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 TCF15Q12870 199 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 CES5AQ6NT32 575 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 KANK3Q6NY19 840 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 CPLX2Q6PUV4 134 aaKnown RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 DDX53Q86TM3 631 aaKnown RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 C12orf76Q8N812 135 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 RSPH1Q8WYR4 309 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 IGSF21Q96ID5 467 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 JPH2Q9BR39 696 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-209ENST00000530620 PHF20Q9BVI0 1012 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 GBP3Q9H0R5 595 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 MINDY3Q9H8M7 445 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
C11orf54-209ENST00000530620 STK36Q9NRP7 1315 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 ZNF623O75123 536 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 OFD1O75665 1012 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 GALTP07902 379 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 CTSAP10619 480 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
C11orf54-209ENST00000530620 AFF1P51825 1210 aaKnown RBP11.91□□□□□ -0.5
C11orf54-209ENST00000530620 POLGP54098 1239 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-209ENST00000530620 KIAA1841Q6NSI8 718 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 AGMOQ6ZNB7 445 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 ZNF280BQ86YH2 543 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 KREMEN2Q8NCW0 462 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 SLC22A17Q8WUG5 538 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
C11orf54-209ENST00000530620 SLC7A3Q8WY07 619 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 HAS1Q92839 578 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 CEP170P1Q96L14 293 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 FAM20AQ96MK3 541 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 LXNQ9BS40 222 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-209ENST00000530620 SMOC2Q9H3U7 446 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 DHX33Q9H6R0 707 aaKnown RBP11.91□□□□□ -0.5
C11orf54-209ENST00000530620 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 DZANK1Q9NVP4 752 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 PCDHB2Q9Y5E7 798 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 IRAK3Q9Y616 596 aa11.91□□□□□ -0.5
C11orf54-209ENST00000530620 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
C11orf54-209ENST00000530620 DDHD2O94830 711 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 BRD1O95696 1058 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 ASGR2P07307 311 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 SRGAP2CP0DJJ0 459 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-209ENST00000530620 RFC5P40937 340 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 MTHFRP42898 656 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 SPIRE1Q08AE8 756 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 MTMR3Q13615 1198 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
C11orf54-209ENST00000530620 EMC2Q15006 297 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PTPN14Q15678 1187 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
C11orf54-209ENST00000530620 UBXN11Q5T124 520 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 TDRD5Q8NAT2 981 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms