RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 DAAM1Q9Y4D1 1078 aa18.29■□□□□ 0.52
SREK1-212ENST00000522912 IGKV6-21A0A0C4DH24 114 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 EFCAB8A8MWE9 144 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 ADCY3O60266 1144 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 SCP2P22307 547 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 MAP2K1Q02750 393 aaPredicted RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 GRB14Q14449 540 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 ARHGAP44Q17R89 818 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 FAM110CQ1W6H9 321 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 IER5Q5VY09 327 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 TRAPPC11Q7Z392 1133 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 ZNF467Q7Z7K2 595 aaPredicted RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 OLIG1Q8TAK6 271 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 TRAPPC12Q8WVT3 735 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 SEMA4DQ92854 862 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 TMEM134Q9H6X4 195 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 UBE2TQ9NPD8 197 aaPredicted RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 NENFQ9UMX5 172 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 EVPLQ92817 2033 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 TULP1O00294 542 aaPredicted RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 EXTL3O43909 919 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 HUNKP57058 714 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 PAPD7Q5XG87 772 aaKnown RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 TXLNBQ8N3L3 684 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 LRRC71Q8N4P6 559 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 TARS2Q9BW92 718 aaKnown RBP18.28■□□□□ 0.52
SREK1-212ENST00000522912 SUGCTQ9HAC7 445 aa18.28■□□□□ 0.52
SREK1-212ENST00000522912 FOXN3O00409 490 aaPredicted RBP18.27■□□□□ 0.52
SREK1-212ENST00000522912 TACC1O75410 805 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 RFX1P22670 979 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 SLC26A2P50443 739 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 DPP9Q86TI2 863 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 TRIM58Q8NG06 486 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 TMEM8AQ9HCN3 771 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 LUC7LQ9NQ29 371 aaKnown RBP18.27■□□□□ 0.52
SREK1-212ENST00000522912 NAGPAQ9UK23 515 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 COQ4Q9Y3A0 265 aa18.27■□□□□ 0.52
SREK1-212ENST00000522912 DOCK3Q8IZD9 2030 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 ZNF233A6NK53 670 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 DDX3XO00571 662 aaKnown RBP eCLIP18.27■□□□□ 0.515e-11■■□□□ 12.6
SREK1-212ENST00000522912 ANXA13P27216 316 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 ADCYAP1R1P41586 468 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 LAMTOR4Q0VGL1 99 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 LAMC2Q13753 1193 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 NAB2Q15742 525 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 KRT39Q6A163 491 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 RSRC2Q7L4I2 434 aaKnown RBP18.27■□□□□ 0.51
SREK1-212ENST00000522912 SRGAP1Q7Z6B7 1085 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 PSPC1Q8WXF1 523 aaKnown RBP18.27■□□□□ 0.51
SREK1-212ENST00000522912 UBXN4Q92575 508 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 SYT11Q9BT88 431 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 RNPEPQ9H4A4 650 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.27■□□□□ 0.515e-7■■■■■ 81.2
SREK1-212ENST00000522912 PUF60Q9UHX1 559 aaKnown RBP18.27■□□□□ 0.51
SREK1-212ENST00000522912 AGO2Q9UKV8 859 aaKnown RBP18.27■□□□□ 0.51
SREK1-212ENST00000522912 TRPC6Q9Y210 931 aa18.27■□□□□ 0.51
SREK1-212ENST00000522912 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.26■□□□□ 0.51
SREK1-212ENST00000522912 ANO9A1A5B4 782 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 GH1P01241 217 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 DLATP10515 647 aaKnown RBP18.26■□□□□ 0.51
SREK1-212ENST00000522912 KLRC1P26715 233 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 NLRP11P59045 1033 aaKnown RBP18.26■□□□□ 0.51
SREK1-212ENST00000522912 ENPEPQ07075 957 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 WHAMMP3Q1A5X7 153 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 KIAA0753Q2KHM9 967 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 CRELD2Q6UXH1 353 aaPredicted RBP18.26■□□□□ 0.51
SREK1-212ENST00000522912 DNAAF5Q86Y56 855 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 TCP11Q8WWU5 503 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 KAT5Q92993 513 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 MAML3Q96JK9 1138 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 FAM84AQ96KN4 292 aa18.26■□□□□ 0.51
SREK1-212ENST00000522912 TTLL13PA6NNM8 815 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 BUB1O43683 1085 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 GAS2O43903 313 aaKnown RBP18.25■□□□□ 0.51
SREK1-212ENST00000522912 HBP1O60381 514 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 GTF2H1P32780 548 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 WNT7BP56706 349 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 C10orf76Q5T2E6 689 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 ALKBH5Q6P6C2 394 aaKnown RBP18.25■□□□□ 0.51
SREK1-212ENST00000522912 RNF10Q8N5U6 811 aaKnown RBP18.25■□□□□ 0.51
SREK1-212ENST00000522912 CEP112Q8N8E3 955 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 SLC30A5Q8TAD4 765 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 NPLOC4Q8TAT6 608 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 LNX1Q8TBB1 728 aaPredicted RBP18.25■□□□□ 0.51
SREK1-212ENST00000522912 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 CCDC113Q9H0I3 377 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 KIAA1586Q9HCI6 787 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 SAR1BQ9Y6B6 198 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 SRGAP2O75044 1071 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 LGALS2P05162 132 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 MAPK4P31152 587 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 ACOT2P49753 483 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 BMS1Q14692 1282 aaKnown RBP18.25■□□□□ 0.51
SREK1-212ENST00000522912 KIF22Q14807 665 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 CDCA2Q69YH5 1023 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms