RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 SKIP12755 728 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 ZNF76P36508 570 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 TROAPQ12815 778 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 DRP2Q13474 957 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 PPM1LQ5SGD2 360 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 TCEAL6Q6IPX3 200 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 CATIPQ7Z7H3 387 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 LINC01465Q8N7H1 131 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 FAM3CQ92520 227 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 TCEAL3Q969E4 200 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 PGBD4Q96DM1 585 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 FDXACB1Q9BRP7 624 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 RSAD1Q9HA92 442 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 CHST12Q9NRB3 414 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 HCFC1R1Q9NWW0 138 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 GABBR1Q9UBS5 961 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 TCEAL9Q9UHQ7 104 aa12.48□□□□□ -0.41
CTNNA1-234ENST00000522227 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 SDSP20132 328 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 PDE1AP54750 535 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 DSG1Q02413 1049 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 GAS6Q14393 721 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 CEP55Q53EZ4 464 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 LILRA6Q6PI73 481 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 LONP2Q86WA8 852 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 NPAS3Q8IXF0 933 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 CCDC82Q8N4S0 544 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 BRD9Q9H8M2 597 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 LY9Q9HBG7 655 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 RBM12Q9NTZ6 932 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 CEP131Q9UPN4 1083 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 PCDHB2Q9Y5E7 798 aa12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-234ENST00000522227 CYSRT1A8MQ03 144 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 MAN2B1O00754 1011 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 C8AP07357 584 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 SFPQP23246 707 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 LIN9Q5TKA1 542 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 PLA2G4DQ86XP0 818 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 SPZ1Q9BXG8 430 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 GPR62Q9BZJ7 368 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 C2orf42Q9NWW7 574 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 WASF3Q9UPY6 502 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 SAMM50Q9Y512 469 aa12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 MAFBQ9Y5Q3 323 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-234ENST00000522227 GREB1Q4ZG55 1949 aa12.46□□□□□ -0.42
CTNNA1-234ENST00000522227 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 C4orf47A7E2U8 309 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 CNR2P34972 360 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 RAB27AP51159 221 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 TRDNQ13061 729 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 PABPC1LQ4VXU2 614 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 KBTBD6Q86V97 674 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 COLGALT2Q8IYK4 626 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 SRBD1Q8N5C6 995 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 CTCFLQ8NI51 663 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 EDEM2Q9BV94 578 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 KANSL3Q9P2N6 904 aa12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-234ENST00000522227 K7ESF4 209 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 MEIS1O00470 390 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 DHX15O43143 795 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 HYAL3O43820 417 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 ZNF623O75123 536 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 XYLBO75191 536 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 ECI2O75521 394 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 PAPLNO95428 1278 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 SEC24BO95487 1268 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 PSAPP07602 524 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 RXRAP19793 462 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 CCNE1P24864 410 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 Q6ZS52 159 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 PDZD3Q86UT5 571 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 SH2D3AQ9BRG2 576 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 ANO3Q9BYT9 981 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 CHST7Q9NS84 486 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 DIAPH3Q9NSV4 1193 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 FNIP2Q9P278 1114 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 DNMT3BQ9UBC3 853 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 CACNG4Q9UBN1 327 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 FBXW11Q9UKB1 542 aa12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 MRPS23Q9Y3D9 190 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-234ENST00000522227 PIAS3Q9Y6X2 628 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms