RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 CHRNA3P32297 505 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 COPB2P35606 906 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLC8A3P57103 927 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPP1R21Q6ZMI0 780 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 FAM83AQ86UY5 434 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 PALM2Q8IXS6 379 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TPCN2Q8NHX9 752 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 P3H4Q92791 437 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TAAR1Q96RJ0 339 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 ADPGKQ9BRR6 497 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLC9A2Q9UBY0 812 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TRAF3IP3Q9Y228 551 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 A0A087WUV0 522 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 EML1O00423 815 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 ICAM1P05362 532 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 SNX16P57768 344 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 ANGEL2Q5VTE6 544 aaKnown RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 CCDC137Q6PK04 289 aaKnown RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLC30A5Q8TAD4 765 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 JPH2Q9BR39 696 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TRIM51Q9BSJ1 452 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZNF302Q9NR11 478 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 GGA3Q9NZ52 723 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 FBXO40Q9UH90 709 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
PCDHGB4-201ENST00000519479 MEIS2O14770 477 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 NDC80O14777 642 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLC12A3P55017 1021 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZNF720Q7Z2F6 126 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 MKL1Q969V6 931 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 RSRC1Q96IZ7 334 aaKnown RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 TIPINQ9BVW5 301 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 WNT8AQ9H1J5 351 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 KCNMB3Q9NPA1 279 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 OLFML3Q9NRN5 406 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 REXO2Q9Y3B8 237 aaKnown RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 COL1A1P02452 1464 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 DYNLT1P63172 113 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 GABPAQ06546 454 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 PRAMEF18Q5VWM3 479 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 FASTKD5Q7L8L6 764 aaKnown RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZIM3Q96PE6 472 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 FAM187AA6NFU0 413 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 FOXN3O00409 490 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 CASP5P51878 434 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 CLNS1AP54105 237 aaKnown RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 PMS2P54278 862 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 GUCY1A3Q02108 690 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 COG2Q14746 738 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 FYB2Q5VWT5 728 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPP1R2P3Q6NXS1 205 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 CTAGE3PQ8IX95 158 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 CCDC197Q8NCU1 140 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 CALR3Q96L12 384 aaKnown RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 TLR10Q9BXR5 811 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 GPRC5CQ9NQ84 441 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 PSD3Q9NYI0 1048 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 AIPL1Q9NZN9 384 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZBTB39O15060 712 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 DGAT1O75907 488 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 KRT81Q14533 505 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 TKFCQ3LXA3 575 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPP1R16BQ96T49 567 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 KIFC3Q9BVG8 833 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 AKT3Q9Y243 479 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 ALG6Q9Y672 507 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 SCINQ9Y6U3 715 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 FAM169AQ9Y6X4 670 aa12.06□□□□□ -0.48
PCDHGB4-201ENST00000519479 NFIBO00712 420 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLITRK3O94933 977 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 MXRA7P84157 204 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ECM1Q16610 540 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 OTOP1Q7RTM1 612 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 HDAC7Q8WUI4 952 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ATG4CQ96DT6 458 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 CELF4Q9BZC1 486 aaKnown RBP12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ADCY2Q08462 1091 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 CCDC6Q16204 474 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.05□□□□□ -0.481e-7■■■■■ 78
PCDHGB4-201ENST00000519479 SLC35C1Q96A29 364 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 THAP2Q9H0W7 228 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 KLHL14Q9P2G3 628 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 INTUQ9ULD6 942 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ABT1Q9ULW3 272 aaKnown RBP12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms