RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 AGBL1Q96MI9 1066 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 KREMEN1Q96MU8 473 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 XPO6Q96QU8 1125 aaKnown RBP14.02□□□□□ -0.16
PTPN7-217ENST00000495688 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.16
PTPN7-217ENST00000495688 ARHGEF10LQ9HCE6 1279 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 KCNH7Q9NS40 1196 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 SYNGAP1Q96PV0 1343 aa14.02□□□□□ -0.16
PTPN7-217ENST00000495688 FAM187AA6NFU0 413 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 ENTPD3O75355 529 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
PTPN7-217ENST00000495688 MMEP08473 750 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 NUDT17P0C025 328 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 EIF3BP55884 814 aaKnown RBP14.02□□□□□ -0.17
PTPN7-217ENST00000495688 MAP2K1Q02750 393 aaPredicted RBP14.02□□□□□ -0.17
PTPN7-217ENST00000495688 ERMARDQ5T6L9 678 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 INTS8Q75QN2 995 aaKnown RBP14.02□□□□□ -0.17
PTPN7-217ENST00000495688 MIGA2Q7L4E1 593 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 CACNA2D3Q8IZS8 1091 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 FAM84AQ96KN4 292 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 CD248Q9HCU0 757 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 HSPBP1Q9NZL4 362 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 GGA2Q9UJY4 613 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 TRPC6Q9Y210 931 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 PCDHA3Q9Y5H8 950 aa14.02□□□□□ -0.17
PTPN7-217ENST00000495688 C5orf60A6NFR6 353 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 ADRB2P07550 413 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 CHRNA5P30532 468 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 SPP2Q13103 211 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 C11orf63Q6NUN7 778 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 MIER3Q7Z3K6 550 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 UBL4BQ8N7F7 174 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC127Q96BQ5 260 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC114Q96M63 670 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 LARSQ9P2J5 1176 aaKnown RBP14.01□□□□□ -0.17
PTPN7-217ENST00000495688 NOCTQ9UK39 431 aaKnown RBP14.01□□□□□ -0.17
PTPN7-217ENST00000495688 HADHBP55084 474 aaKnown RBP14.01□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC38Q502W7 563 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 ANKRD20A8PQ5CZ79 823 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 GKAP1Q5VSY0 366 aaPredicted RBP14.01□□□□□ -0.17
PTPN7-217ENST00000495688 HOOK3Q86VS8 718 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC25Q86WR0 208 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 SEMA4DQ92854 862 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 MXRA8Q9BRK3 442 aa14.01□□□□□ -0.17
PTPN7-217ENST00000495688 YDJCA8MPS7 323 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 MIF4GDA9UHW6 222 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 NFIBO00712 420 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 SLC16A4O15374 487 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 RTN2O75298 545 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 RASSF9O75901 435 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CTNNA2P26232 953 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CHRNA3P32297 505 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 RARRES1P49788 294 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 MXI1P50539 228 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 PPP2R5EQ16537 467 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CBWD2Q8IUF1 395 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC105Q8IYK2 499 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 XXYLT1Q8NBI6 393 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CHMP6Q96FZ7 201 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CEP89Q96ST8 783 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 JPH2Q9BR39 696 aaPredicted RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 KIFC3Q9BVG8 833 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 FAM129AQ9BZQ8 928 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 KLC4Q9NSK0 619 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 RASAL2Q9UJF2 1139 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 DBR1Q9UK59 544 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 MRPL11Q9Y3B7 192 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 SPOPO43791 374 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 RARAP10276 462 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 SMTNP53814 917 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 DRG2P55039 364 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 PEX3P56589 373 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 CETN1Q12798 172 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 HAUS6Q7Z4H7 955 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 ATXN2LQ8WWM7 1075 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 CD101Q93033 1021 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 SAAL1Q96ER3 474 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 ZNF317Q96PQ6 595 aaPredicted RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 NUP85Q9BW27 656 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 TOPORSQ9NS56 1045 aaPredicted RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 HAUS2Q9NVX0 235 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 PCYOX1Q9UHG3 505 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 SCAF8Q9UPN6 1271 aaKnown RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
PTPN7-217ENST00000495688 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
PTPN7-217ENST00000495688 PCNTO95613 3336 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 RGS16O15492 202 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 DHX15O43143 795 aaKnown RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 RFX1P22670 979 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 MMP13P45452 471 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 IFNAR2P48551 515 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 SETQ01105 290 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 FMO1Q01740 532 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 UGCGQ16739 394 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 ZNF564Q8TBZ8 553 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms