RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 HDAC7Q8WUI4 952 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 KCNB2Q92953 911 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 HINFPQ9BQA5 517 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 COLEC11Q9BWP8 271 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 AGXT2Q9BYV1 514 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 RHOBTB2Q9BYZ6 727 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 MINDY3Q9H8M7 445 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 TBC1D17Q9HA65 648 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 EPS15L1Q9UBC2 864 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 CFAP54Q96N23 3096 aa15.91■□□□□ 0.14
VARS-228ENST00000495010 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 KRBA1A5PL33 1030 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 EML1O00423 815 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 GAS2O43903 313 aaKnown RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 RFPL2O75678 378 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 SPATA31D3P0C874 917 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 AXLP30530 894 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 MLH1P40692 756 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 PPP2R5CQ13362 524 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 INF2Q27J81 1249 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 KIAA0319Q5VV43 1072 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 NOTUMQ6P988 496 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 ZC3H14Q6PJT7 736 aaKnown RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 SPATA31D4Q6ZUB0 917 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 KRT25Q7Z3Z0 450 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 PALB2Q86YC2 1186 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 HACE1Q8IYU2 909 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 RIN2Q8WYP3 895 aaPredicted RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 FAM20AQ96MK3 541 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 MBOAT7Q96N66 472 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 MYADMQ96S97 322 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 GAD1Q99259 594 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 TRIM6Q9C030 488 aaPredicted RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 PLEKHA4Q9H4M7 779 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 DHX33Q9H6R0 707 aaKnown RBP15.9■□□□□ 0.14
VARS-228ENST00000495010 RXFP1Q9HBX9 757 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 MARCH5Q9NX47 278 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.9■□□□□ 0.14
VARS-228ENST00000495010 IPPQ9Y573 584 aa15.9■□□□□ 0.14
VARS-228ENST00000495010 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 ARL5CA6NH57 179 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 SLC37A4O43826 429 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 YWHABP31946 246 aaKnown RBP15.89■□□□□ 0.13
VARS-228ENST00000495010 DSG1Q02413 1049 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 EMC2Q15006 297 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 PCBP1Q15365 356 aaKnown RBP eCLIP15.89■□□□□ 0.131e-6■□□□□ 8.6
VARS-228ENST00000495010 XKR9Q5GH70 373 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 GET4Q7L5D6 327 aaPredicted RBP15.89■□□□□ 0.13
VARS-228ENST00000495010 FERMT3Q86UX7 667 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 SKAP1Q86WV1 359 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 ZNF579Q8NAF0 562 aaKnown RBP15.89■□□□□ 0.13
VARS-228ENST00000495010 DAGLBQ8NCG7 672 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 SMG8Q8ND04 991 aaKnown RBP15.89■□□□□ 0.13
VARS-228ENST00000495010 GPR152Q8TDT2 470 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 CCDC51Q96ER9 411 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 MTRQ99707 1265 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.89■□□□□ 0.13
VARS-228ENST00000495010 SIT1Q9Y3P8 196 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 R4GN57 208 aa15.89■□□□□ 0.13
VARS-228ENST00000495010 SPTBN4Q9H254 2564 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 INO80B-WBP1J3KQ70 363 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 SCNN1GP51170 649 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 CREMQ03060 361 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 TFDP1Q14186 410 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 MXD4Q14582 209 aaPredicted RBP15.88■□□□□ 0.13
VARS-228ENST00000495010 USP41Q3LFD5 358 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 PHLDB3Q6NSJ2 640 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 GLYCTKQ8IVS8 523 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 C4orf19Q8IY42 314 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
VARS-228ENST00000495010 CPB2Q96IY4 423 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 LXNQ9BS40 222 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 EIF2AQ9BY44 585 aaKnown RBP15.88■□□□□ 0.13
VARS-228ENST00000495010 NT5C3AQ9H0P0 336 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 ARHGEF3Q9NR81 526 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 ZDHHC7Q9NXF8 308 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 VAV3Q9UKW4 847 aa15.88■□□□□ 0.13
VARS-228ENST00000495010 M0R2N6 131 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 TGM5O43548 720 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 CCNT1O60563 726 aaKnown RBP15.87■□□□□ 0.13
VARS-228ENST00000495010 TSPAN1O60635 241 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 C1RP00736 705 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
VARS-228ENST00000495010 LAMP2P13473 410 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 GCFC2P16383 781 aaKnown RBP15.87■□□□□ 0.13
VARS-228ENST00000495010 EVCP57679 992 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 DSC1Q08554 894 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 EPHA7Q15375 998 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 DCLRE1AQ6PJP8 1040 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 CENPQQ7L2Z9 268 aaPredicted RBP15.87■□□□□ 0.13
VARS-228ENST00000495010 NEK8Q86SG6 692 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 KIAA2013Q8IYS2 634 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 ZNF707Q96C28 371 aaPredicted RBP15.87■□□□□ 0.13
VARS-228ENST00000495010 SHDQ96IW2 340 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 NAP1L4Q99733 375 aaKnown RBP15.87■□□□□ 0.13
VARS-228ENST00000495010 PRKD2Q9BZL6 878 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 CSRNP2Q9H175 543 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms