RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
NUP50-216ENST00000486184 ENPP3O14638 875 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 EIF3DO15371 548 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUP50-216ENST00000486184 KLRC4O43908 158 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 MGEA5O60502 916 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 MYBP10242 640 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
NUP50-216ENST00000486184 GSE1Q14687 1217 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 AMHR2Q16671 573 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 DCAF4L1Q3SXM0 396 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 ZNF568Q3ZCX4 644 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 C9orf50Q5SZB4 431 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
NUP50-216ENST00000486184 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 MAP4K3Q8IVH8 894 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 RNF169Q8NCN4 708 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
NUP50-216ENST00000486184 HPS3Q969F9 1004 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 SYAP1Q96A49 352 aaPredicted RBP12.49□□□□□ -0.41
NUP50-216ENST00000486184 VWCEQ96DN2 955 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
NUP50-216ENST00000486184 TMEM206Q9H813 350 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 ANKFY1Q9P2R3 1169 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 PCDHB7Q9Y5E2 793 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 PCDHA5Q9Y5H7 936 aa12.49□□□□□ -0.41
NUP50-216ENST00000486184 A0A1B0GUA9 196 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 PRPF6O94906 941 aaKnown RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 UPP2O95045 317 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 NPTXRO95502 500 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 SARSP49591 514 aaKnown RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 CASP5P51878 434 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 EHHADHQ08426 723 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 DSC3Q14574 896 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 NT5DC1Q5TFE4 455 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.48□□□□□ -0.41
NUP50-216ENST00000486184 TAS1R3Q7RTX0 852 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 CDR2LQ86X02 465 aaPredicted RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 NPAS4Q8IUM7 802 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 LINC01599Q8WXQ3 324 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 KCNN1Q92952 543 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 PGBD4Q96DM1 585 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 ACO2Q99798 780 aaKnown RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 PDZD7Q9H5P4 517 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 FAM105AQ9NUU6 356 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 TNFSF13BQ9Y275 285 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
NUP50-216ENST00000486184 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
NUP50-216ENST00000486184 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
NUP50-216ENST00000486184 C9IYK1 514 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 CLDN3O15551 220 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 HOXA2O43364 376 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 TOM1L1O75674 476 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 PPP1R37O75864 691 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
NUP50-216ENST00000486184 DEFB103AP81534 67 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 STIM1Q13586 685 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 NOLC1Q14978 699 aaKnown RBP eCLIP12.47□□□□□ -0.41
NUP50-216ENST00000486184 SLFN12LQ6IEE8 588 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 FAM117BQ6P1L5 589 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 MPZL3Q6UWV2 235 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 ZBTB33Q86T24 672 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 ECHDC2Q86YB7 292 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 ABI1Q8IZP0 508 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 PHOSPHO2Q8TCD6 241 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 FGFBP2Q9BYJ0 223 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 USP20Q9Y2K6 914 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 PCDHB2Q9Y5E7 798 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 TRIP11Q15643 1979 aa12.47□□□□□ -0.41
NUP50-216ENST00000486184 A0A1W2PPC1 479 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 RBAK-RBAKDNI3L0D1 243 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 BIN1O00499 593 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 EOMESO95936 686 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 PIGRP01833 764 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 EDN1P05305 212 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 MCF2P10911 925 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 ITGA4P13612 1032 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 STK4Q13043 487 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 ZNF658Q5TYW1 1059 aaPredicted RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 EEF1DP3Q658K8 133 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 HS2ST1Q7LGA3 356 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 RTN4RL1Q86UN2 441 aaPredicted RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 KIAA0895Q8NCT3 520 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 GLIS3Q8NEA6 775 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms