RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 MCCP23508 829 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 MAOBP27338 520 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CALML3P27482 149 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 MAP4P27816 1152 aaKnown RBP6.29□□□□□ -1.4
PTPN4-210ENST00000485247 SSTR4P31391 388 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 SLC1A4P43007 532 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 ATXN1P54253 815 aaKnown RBP6.29□□□□□ -1.4
PTPN4-210ENST00000485247 TTF1Q15361 905 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-210ENST00000485247 LY6KQ17RY6 165 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 KIAA0753Q2KHM9 967 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
PTPN4-210ENST00000485247 SLC30A10Q6XR72 485 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 FAM160B2Q86V87 743 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CCDC105Q8IYK2 499 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 DTWD2Q8NBA8 298 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 C2CD4AQ8NCU7 369 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-210ENST00000485247 GMCL1P1Q8NEA9 526 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 VN1R2Q8NFZ6 395 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 SPPL3Q8TCT6 385 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 RUBCNQ92622 972 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 MKL1Q969V6 931 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CEP95Q96GE4 821 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 NEK1Q96PY6 1258 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CYP4F12Q9HCS2 524 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 MRS2Q9HD23 443 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 MTMR4Q9NYA4 1195 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 DCTN4Q9UJW0 460 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 SLC4A4Q9Y6R1 1079 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 SPTBN2O15020 2390 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CEP250Q9BV73 2442 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 IGKV6D-41A0A0C4DH26 115 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 PRR19A6NJB7 356 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 MINDY4BA8MYZ0 360 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 C2CD4DB7Z1M9 353 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 GOLIM4O00461 696 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-210ENST00000485247 PRDM1O75626 825 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 TTLL1O95922 423 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 GH1P01241 217 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 CHGBP05060 677 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 ICAM1P05362 532 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 ASGR2P07307 311 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 AOC1P19801 751 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 ARHGAP1Q07960 439 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 DSC3Q14574 896 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 PWP2Q15269 919 aaKnown RBP6.28□□□□□ -1.4
PTPN4-210ENST00000485247 POU4F3Q15319 338 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 DGKDQ16760 1214 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 SEPT14Q6ZU15 432 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 KCTD1Q719H9 257 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 SERINC5Q86VE9 423 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 ATP8B4Q8TF62 1192 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 RIN2Q8WYP3 895 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-210ENST00000485247 P2RX5Q93086 422 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 DNAJC2Q99543 621 aaKnown RBP6.28□□□□□ -1.4
PTPN4-210ENST00000485247 MPHOSPH6Q99547 160 aaKnown RBP6.28□□□□□ -1.4
PTPN4-210ENST00000485247 KATNAL1Q9BW62 490 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 S1PR5Q9H228 398 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 RC3H2Q9HBD1 1191 aaKnown RBP6.28□□□□□ -1.4
PTPN4-210ENST00000485247 CDH22Q9UJ99 828 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 NR2E1Q9Y466 385 aa6.28□□□□□ -1.4
PTPN4-210ENST00000485247 GREB1LQ9C091 1923 aaPredicted RBP6.27□□□□□ -1.41
PTPN4-210ENST00000485247 HAS3O00219 553 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 F2P00734 622 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 ADRB1P08588 477 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 ADH5P11766 374 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 EDNRBP24530 442 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 TECP42680 631 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
PTPN4-210ENST00000485247 DUSP6Q16828 381 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 CCDC62Q6P9F0 684 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 RNF207Q6ZRF8 634 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 AACSQ86V21 672 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 ZNF444Q8N0Y2 327 aaPredicted RBP6.27□□□□□ -1.41
PTPN4-210ENST00000485247 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 SHKBP1Q8TBC3 707 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 APBB2Q92870 758 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 ATP6V0A1Q93050 837 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 ARPP21Q9UBL0 812 aaPredicted RBP6.27□□□□□ -1.41
PTPN4-210ENST00000485247 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
PTPN4-210ENST00000485247 MYO10Q9HD67 2058 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 WDR87Q6ZQQ6 2873 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 MYH4Q9Y623 1939 aa6.27□□□□□ -1.41
PTPN4-210ENST00000485247 ZBED9Q6R2W3 1325 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 USP24Q9UPU5 2620 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 KIAA1324LA8MWY0 1029 aaPredicted RBP6.26□□□□□ -1.41
PTPN4-210ENST00000485247 B4DLN1 442 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 TREHO43280 583 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 SORBS3O60504 671 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 DGKIO75912 1065 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 CYP11A1P05108 521 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 SRGAP2BP0DMP2 458 aa6.26□□□□□ -1.41
PTPN4-210ENST00000485247 SDHBP21912 280 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms