RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PLPP4Q5VZY2 271 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 ARL6IP4Q66PJ3 421 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 CDCA2Q69YH5 1023 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 RINT1Q6NUQ1 792 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 CLEC17AQ6ZS10 378 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 TMEM173Q86WV6 379 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 SLC39A11Q8N1S5 342 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 DEPTORQ8TB45 409 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 URGCPQ8TCY9 931 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 MRPS27Q92552 414 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 KIFAP3Q92845 792 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 IFT74Q96LB3 600 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 GAD1Q99259 594 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 TCF25Q9BQ70 676 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 TRIM6Q9C030 488 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 FZD8Q9H461 694 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 NXF3Q9H4D5 531 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 TLE6Q9H808 572 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 ENTPD7Q9NQZ7 604 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 PRMT7Q9NVM4 692 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 MIOSQ9NXC5 875 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 KLK14Q9P0G3 267 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 PUF60Q9UHX1 559 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 MTMR6Q9Y217 621 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 PLXNA4Q9HCM2 1894 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 NPHP3-ACAD11A0A0J9YXS1 232 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 A0A1B0GUA9 196 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 CCDC169A6NNP5 214 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 HIDE1A8MVS5 230 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PRKCBP05771 671 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 GALTP07902 379 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PLA2G4BP0C869 781 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 IL9P15248 144 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 MARCKSP29966 332 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 MLH1P40692 756 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 UBA7P41226 1012 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 SLC11A1P49279 550 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 SCNN1GP51170 649 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 RBM10P98175 930 aaKnown RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 ADAM15Q13444 863 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PRPF4BQ13523 1007 aaKnown RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PKP1Q13835 747 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 NFKBIBQ15653 356 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 MAPK6Q16659 721 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 LEXMQ3ZCV2 418 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PTCRAQ6ISU1 281 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 SLC27A1Q6PCB7 646 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 C1orf186Q6ZWK4 172 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 TMC7Q7Z402 723 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 DAW1Q8N136 415 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 LRRC15Q8TF66 581 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 BCL7CQ8WUZ0 217 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 CCDC51Q96ER9 411 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 ZFP42Q96MM3 310 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 FAM193BQ96PV7 902 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 CCDC113Q9H0I3 377 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 C2orf40Q9H1Z8 148 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 PARP2Q9UGN5 583 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 MYO7AQ13402 2215 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 TCF20Q9UGU0 1960 aaKnown RBP9.13□□□□□ -0.95
HDAC6-221ENST00000477561 ATG2AQ2TAZ0 1938 aa9.13□□□□□ -0.95
HDAC6-221ENST00000477561 CNTNAP2Q9UHC6 1331 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 ARL5CA6NH57 179 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 K7ERI5 159 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 ACKR2O00590 384 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 FSCN2O14926 492 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 NCK2O43639 380 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 TBX10O75333 385 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 BMP15O95972 392 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 F13A1P00488 732 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 ALDH2P05091 517 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 PPM1AP35813 382 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 NPTX2P47972 431 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 NDUFV1P49821 464 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 SLC12A3P55017 1021 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 MAPK7Q13164 816 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 COL19A1Q14993 1142 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
HDAC6-221ENST00000477561 PTPAQ15257 358 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 FAM187BQ17R55 369 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 CTC1Q2NKJ3 1217 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 TMEM119Q4V9L6 283 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 HYIQ5T013 277 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 NT5DC1Q5TFE4 455 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 EEF1DP3Q658K8 133 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 LLGL2Q6P1M3 1020 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 USP49Q70CQ1 688 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 VPS52Q8N1B4 723 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 SYT2Q8N9I0 419 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-221ENST00000477561 RASSF8Q8NHQ8 419 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 AUTS2Q8WXX7 1259 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 PPP2R3CQ969Q6 453 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 CALML4Q96GE6 196 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms