RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	LTB4R2	Q9NPC1	389 aa		13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	PRMT8	Q9NR22	394 aa	Predicted RBP	13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	DAXX	Q9UER7	740 aa	Predicted RBP	13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	CDH7	Q9ULB5	785 aa		13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	PIN4	Q9Y237	131 aa	Known RBP	13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	MYH15	Q9Y2K3	1946 aa		13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	FASN	P49327	2511 aa	Known RBP	13.78	□□□□□ -0.2
SBF1-208	ENST00000477234	WDR64	B1ANS9	1081 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	C2CD2L	O14523	706 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	OAT	P04181	439 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	ATP4A	P20648	1035 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	TGM1	P22735	817 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	RPS6KB1	P23443	525 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	CNR2	P34972	360 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	NAPA	P54920	295 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	COL9A2	Q14055	689 aa	Predicted RBP	13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	ADCK5	Q3MIX3	580 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	SYNE3	Q6ZMZ3	975 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	DHX32	Q7L7V1	743 aa	Known RBP	13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	HSCB	Q8IWL3	235 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	EXOC8	Q8IYI6	725 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	SNX21	Q969T3	373 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	RSAD1	Q9HA92	442 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	PDRG1	Q9NUG6	133 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	FNIP2	Q9P278	1114 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	GABBR1	Q9UBS5	961 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	DNAJB4	Q9UDY4	337 aa		13.77	□□□□□ -0.21
SBF1-208	ENST00000477234	ZFHX4	Q86UP3	3567 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	MAN2B1	O00754	1011 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	NRP1	O14786	923 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	DHX15	O43143	795 aa	Known RBP	13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	XYLB	O75191	536 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	CYP3A4	P08684	503 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	SFN	P31947	248 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	DSG1	Q02413	1049 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	ADCY1	Q08828	1119 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	SPEM2	Q0P670	501 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	CSRP2	Q16527	193 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	CATSPER4	Q7RTX7	472 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	LRRC71	Q8N4P6	559 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	ZNF707	Q96C28	371 aa	Predicted RBP	13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	VN1R3	Q9BXE9	311 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	SENP2	Q9HC62	589 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	SLC12A7	Q9Y666	1083 aa		13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.76	□□□□□ -0.21
SBF1-208	ENST00000477234	WDR81	Q562E7	1941 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	RFPL2	O75678	378 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	LIFR	P42702	1097 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	CCR3	P51677	355 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	COL9A3	Q14050	684 aa	Predicted RBP	13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	USP41	Q3LFD5	358 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	LIN9	Q5TKA1	542 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	RTL10	Q7L3V2	364 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	FBXL16	Q8N461	479 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	LPP	Q93052	612 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	PHF20	Q9BVI0	1012 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	COLEC11	Q9BWP8	271 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	PCDHB2	Q9Y5E7	798 aa		13.75	□□□□□ -0.21
SBF1-208	ENST00000477234	F5	P12259	2224 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	ZMYND10	O75800	440 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	PLEKHA8P1	O95397	391 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	HOXA9	P31269	272 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	LIMK1	P53667	647 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	NCBP1	Q09161	790 aa	Known RBP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	PRR23C	Q6ZRP0	262 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	MRPL10	Q7Z7H8	261 aa	Known RBP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	ZNF280B	Q86YH2	543 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	HACE1	Q8IYU2	909 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	FANCB	Q8NB91	859 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	SEMA4G	Q9NTN9	838 aa		13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	RBM28	Q9NW13	759 aa	Known RBP	13.74	□□□□□ -0.21
SBF1-208	ENST00000477234	SMCO2	A6NFE2	343 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	TGM5	O43548	720 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	PRC1	O43663	620 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	LRRN2	O75325	713 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	PROS1	P07225	676 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	FGFR4	P22455	802 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	PML	P29590	882 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	JAK3	P52333	1124 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	EXOSC10	Q01780	885 aa	Known RBP	13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	PRKCE	Q02156	737 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	PDXDC1	Q6P996	788 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	C1orf228	Q6PIY5	440 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	PARM1	Q6UWI2	310 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	TMTC3	Q6ZXV5	915 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	RDM1	Q8NG50	284 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	DNASE1L2	Q92874	299 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	FGF14	Q92915	247 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	DISC1	Q9NRI5	854 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	KCNH3	Q9ULD8	1083 aa		13.73	□□□□□ -0.21
SBF1-208	ENST00000477234	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.73	□□□□□ -0.21

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