RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 TYW1Q9NV66 732 aaKnown RBP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 ADAM22Q9P0K1 906 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 ZMYM2Q9UBW7 1377 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 KRT16P08779 473 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 ATP2A2P16615 1042 aaKnown RBP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 HLTFQ14527 1009 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 EPHA7Q15375 998 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 NUGGCQ68CJ6 796 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 DDX42Q86XP3 938 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 MYCT1Q8N699 235 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 SLC35C1Q96A29 364 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 TLCD1Q96CP7 247 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 PAIP2Q9BPZ3 127 aaKnown RBP14.01□□□□□ -0.17
CCNL1-216ENST00000475298 MTFR1LQ9H019 292 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 FBXL5Q9UKA1 691 aa14.01□□□□□ -0.17
CCNL1-216ENST00000475298 UTRNP46939 3433 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 GRID2IPA4D2P6 1211 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 BHMG1C9JSJ3 638 aaPredicted RBP14□□□□□ -0.17
CCNL1-216ENST00000475298 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
CCNL1-216ENST00000475298 PSMD10O75832 226 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 UBOX5O94941 541 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 NPTXRO95502 500 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 TAF11Q15544 211 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 IFI16Q16666 785 aaKnown RBP14□□□□□ -0.17
CCNL1-216ENST00000475298 TEKT4Q8WW24 435 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 GORASP1Q9BQQ3 440 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 SIX2Q9NPC8 291 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 ZBTB21Q9ULJ3 1066 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 TMX2Q9Y320 296 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 FAM13AO94988 1023 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 ARP10275 920 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 KCTD19Q17RG1 926 aaPredicted RBP14□□□□□ -0.17
CCNL1-216ENST00000475298 BMT2Q1RMZ1 405 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 ARHGAP22Q7Z5H3 698 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 LRRC34Q8IZ02 419 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 ATXN2LQ8WWM7 1075 aaKnown RBP14□□□□□ -0.17
CCNL1-216ENST00000475298 LRRC45Q96CN5 670 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 PSMD1Q99460 953 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 TMEM39BQ9GZU3 492 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 CHCHD3Q9NX63 227 aaKnown RBP14□□□□□ -0.17
CCNL1-216ENST00000475298 TMOD2Q9NZR1 351 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 PKD2L1Q9P0L9 805 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 GCNT4Q9P109 453 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 ZNF70Q9UC06 446 aaPredicted RBP14□□□□□ -0.17
CCNL1-216ENST00000475298 TMEM59LQ9UK28 342 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 C2CD2Q9Y426 696 aa14□□□□□ -0.17
CCNL1-216ENST00000475298 DDX39AO00148 427 aaKnown RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 SART1O43290 800 aaKnown RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 POLR2MP0CAP2 368 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 RANBP1P43487 201 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 USP4Q13107 963 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 GALNTL6Q49A17 601 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 C1orf186Q6ZWK4 172 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 ZNF513Q8N8E2 541 aaPredicted RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 ATL2Q8NHH9 583 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 SYT15Q9BQS2 421 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 MOV10L1Q9BXT6 1211 aaKnown RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 CNOT10Q9H9A5 744 aaKnown RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 HERC5Q9UII4 1024 aaKnown RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 TSKSQ9UJT2 592 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 CNTNAP1P78357 1384 aa13.99□□□□□ -0.17
CCNL1-216ENST00000475298 RBBP6Q7Z6E9 1792 aaKnown RBP13.99□□□□□ -0.17
CCNL1-216ENST00000475298 GAS7O60861 476 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 MEI1Q5TIA1 1274 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 KLHL7Q8IXQ5 586 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 FAM81AQ8TBF8 368 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 UBLCP1Q8WVY7 318 aaPredicted RBP13.98□□□□□ -0.17
CCNL1-216ENST00000475298 RBM41Q96IZ5 413 aaKnown RBP13.98□□□□□ -0.17
CCNL1-216ENST00000475298 ELAC2Q9BQ52 826 aaKnown RBP13.98□□□□□ -0.17
CCNL1-216ENST00000475298 UNC45AQ9H3U1 944 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 ECT2Q9H8V3 914 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 GOPCQ9HD26 462 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
CCNL1-216ENST00000475298 G3BP2Q9UN86 482 aaKnown RBP13.98□□□□□ -0.17
CCNL1-216ENST00000475298 LRRC42Q9Y546 428 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 PPFIA2O75334 1257 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 CHN1P15882 459 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 MXRA7P84157 204 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 CUL1Q13616 776 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 KIF2BQ8N4N8 673 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 USP38Q8NB14 1042 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 SLC5A5Q92911 643 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 ADAM7Q9H2U9 754 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 ARHGEF3Q9NR81 526 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 OLFML3Q9NRN5 406 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
CCNL1-216ENST00000475298 LRRD1A4D1F6 860 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 MMEP08473 750 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 GNAZP19086 355 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 RPL13P26373 211 aaKnown RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PRELPP51888 382 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PPP2R5CQ13362 524 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PLS1Q14651 629 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 DLGAP5Q15398 846 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms