RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 GTF2BQ00403 316 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 NCBP1Q09161 790 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 ALCAMQ13740 583 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 POSTNQ15063 836 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 NOTUMQ6P988 496 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 SLC24A5Q71RS6 500 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 HAUS6Q7Z4H7 955 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 RTN4RL1Q86UN2 441 aaPredicted RBP16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 CRIPAKQ8N1N5 446 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 ADAM2Q99965 735 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 STRA6Q9BX79 667 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 BLZF1Q9H2G9 400 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 LMBRD1Q9NUN5 540 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 SLC4A7Q9Y6M7 1214 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 C9IYK1 514 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 ENPP3O14638 875 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 B4GALT5O43286 388 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 RAB27AP51159 221 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 DPYDQ12882 1025 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 PRPF4BQ13523 1007 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 HERC4Q5GLZ8 1057 aaPredicted RBP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 ZNF720Q7Z2F6 126 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 GAS2L1Q99501 681 aaPredicted RBP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 MRPL4Q9BYD3 311 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-203ENST00000470278 A0A0U1RQF3 1178 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 KLRC4O43908 158 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 PIGRP01833 764 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 EDN1P05305 212 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 ATP2A2P16615 1042 aaKnown RBP16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 CASP1P29466 404 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 SARSP49591 514 aaKnown RBP16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 FAM189BP81408 668 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 DEFB103AP81534 67 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 STRN3Q13033 797 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 CCDC85BQ15834 202 aaPredicted RBP16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 TWF2Q6IBS0 349 aaKnown RBP16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 NPAS4Q8IUM7 802 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 SPATA20Q8TB22 786 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 ASB2Q96Q27 587 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 ELAC1Q9H777 363 aaKnown RBP16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 THEGQ9P2T0 379 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 MSRAQ9UJ68 235 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 TBX20Q9UMR3 447 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 PCDHA11Q9Y5I1 949 aa16.41■□□□□ 0.22
CDC42SE1-203ENST00000470278 RFXAPO00287 272 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 N4BP3O15049 544 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 EIF3DO15371 548 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 ZNF623O75123 536 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 GJB5O95377 273 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 SKIP12755 728 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 PROZP22891 400 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 FAM26FQ5R3K3 315 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 UBXN11Q5T124 520 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 SLC27A1Q6PCB7 646 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 TOP1MTQ969P6 601 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 CPB2Q96IY4 423 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 PDZD7Q9H5P4 517 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 FAM105AQ9NUU6 356 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 RAPGEFL1Q9UHV5 662 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 TNFSF13BQ9Y275 285 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 UBE4BO95155 1302 aa16.4■□□□□ 0.22
CDC42SE1-203ENST00000470278 TTLL13PA6NNM8 815 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 TNFRSF10AO00220 468 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 EOMESO95936 686 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 RPN1P04843 607 aaKnown RBP16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 CA3P07451 260 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 STAG3L1P0CL83 205 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 CASP5P51878 434 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 PSMD2Q13200 908 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 KCNB1Q14721 858 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 ATF7IP2Q5U623 682 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 EPM2AIP1Q7L775 607 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZNF598Q86UK7 904 aaKnown RBP16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 ECHDC2Q86YB7 292 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 ADAMTS19Q8TE59 1207 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 RSPH1Q8WYR4 309 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 ACO2Q99798 780 aaKnown RBP16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 PTPRHQ9HD43 1115 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 EXOC1Q9NV70 894 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms