RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PACSIN1Q9BY11 444 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 LRFN2Q9ULH4 789 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 MYO9BQ13459 2157 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 EMSYQ7Z589 1322 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 EML1O00423 815 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ACOT2P49753 483 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 MFAP3P55082 362 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 CNTN2Q02246 1040 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 GABPAQ06546 454 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 WDR59Q6PJI9 974 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF507Q8TCN5 953 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF653Q96CK0 615 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 GPRC5CQ9NQ84 441 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 PTPN22Q9Y2R2 807 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 PBX1P40424 430 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 GSCP56915 257 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 KCNA1Q09470 495 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ARFGAP2Q8N6H7 521 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 MAGOHBQ96A72 148 aaKnown RBP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 EDEM3Q9BZQ6 932 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 KCND1Q9NSA2 647 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 SSU72P8A0A1W2PR75 194 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 FGGP02679 453 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 CDC25CP30307 473 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 SREBF1P36956 1147 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 BSPRYQ5W0U4 402 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 RSRC2Q7L4I2 434 aaKnown RBP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 CHORDC1Q9UHD1 332 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 AKAP3O75969 853 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 PTPRAP18433 802 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-210ENST00000444502 CASP5P51878 434 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 TRIM68Q6AZZ1 485 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF365Q70YC5 407 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 CPLX4Q7Z7G2 160 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
TOP3B-210ENST00000444502 PITPNM2Q9BZ72 1349 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 A0A1W2PQJ5 194 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 MEIS2O14770 477 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 CLTAP09496 248 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 CCNHP51946 323 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 YWHAEP62258 255 aaKnown RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 MYO1EQ12965 1108 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 TMEM119Q4V9L6 283 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 BEND6Q5SZJ8 279 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 KAZNQ674X7 775 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 TRAPPC11Q7Z392 1133 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 NEK9Q8TD19 979 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 TCP11Q8WWU5 503 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 FGFBP2Q9BYJ0 223 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 RBM12Q9NTZ6 932 aaKnown RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PEX10O60683 326 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PHKA2P46019 1235 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 GTF2A2P52657 109 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PLTPP55058 493 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 SNX1Q13596 522 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 TKFCQ3LXA3 575 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 APTXQ7Z2E3 356 aaKnown RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 SPATC1LQ9H0A9 340 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 ANKZF1Q9H8Y5 726 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 KCNK9Q9NPC2 374 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 NUP98P52948 1817 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PDHXO00330 501 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 HGSO14964 777 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 EVI5O60447 810 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 CSDE1O75534 798 aaKnown RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 SLC25A27O95847 323 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 HOXA7P31268 230 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 VAMP7P51809 220 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 MIIPQ5JXC2 388 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 SYTL5Q8TDW5 730 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 UNC45AQ9H3U1 944 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 PRKAG2Q9UGJ0 569 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
TOP3B-210ENST00000444502 ATP8A1Q9Y2Q0 1164 aa11.34□□□□□ -0.59
TOP3B-210ENST00000444502 TMEM150BA6NC51 233 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 INTS8Q75QN2 995 aaKnown RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 EXOC8Q8IYI6 725 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 DNAJC19Q96DA6 116 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 FAM167BQ9BTA0 163 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 USP54Q70EL1 1684 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 LAMB4A4D0S4 1761 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms