RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TAS1R1Q7RTX1 841 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 RABGGTAQ92696 567 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 MSLNLQ96KJ4 702 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 PDZD7Q9H5P4 517 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 TLE6Q9H808 572 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 TLR9Q9NR96 1032 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 KLK14Q9P0G3 267 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 BARX2Q9UMQ3 279 aaPredicted RBP14.1□□□□□ -0.15
GPC1-204ENST00000426280 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 ARL5CA6NH57 179 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 HIP1RO75146 1068 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 SKIP12755 728 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 AXLP30530 894 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 SCNN1GP51170 649 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
GPC1-204ENST00000426280 UBE3AQ05086 875 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 KCNC3Q14003 757 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 TMEM119Q4V9L6 283 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 ARSHQ5FYA8 562 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 SPECC1Q5M775 1068 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 IGSF21Q96ID5 467 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 TCF25Q9BQ70 676 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 CDH22Q9UJ99 828 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 DNM3Q9UQ16 869 aa14.09□□□□□ -0.15
GPC1-204ENST00000426280 NRP1O14786 923 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 MBTPS2O43462 519 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 PDCP20941 246 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 MLH1P40692 756 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 NPTX2P47972 431 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 SLC12A3P55017 1021 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 PEX3P56589 373 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 BECN1Q14457 450 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 DUSP6Q16828 381 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 FAM187BQ17R55 369 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 KANK3Q6NY19 840 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 CABP7Q86V35 215 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 FAM178BQ8IXR5 827 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 COLGALT2Q8IYK4 626 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 EFHBQ8N7U6 833 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 SYT2Q8N9I0 419 aaPredicted RBP14.08□□□□□ -0.16
GPC1-204ENST00000426280 MRPL9Q9BYD2 267 aaKnown RBP14.08□□□□□ -0.16
GPC1-204ENST00000426280 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 SNTG2Q9NY99 539 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 LZTS1Q9Y250 596 aa14.08□□□□□ -0.16
GPC1-204ENST00000426280 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 ACKR2O00590 384 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 INPPL1O15357 1258 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 STX6O43752 255 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 CXCL14O95715 111 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 EFEMP2O95967 443 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 PRKCBP05771 671 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 MARCKSP29966 332 aaPredicted RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 NAMPTP43490 491 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 ALDH7A1P49419 539 aaKnown RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 RNASELQ05823 741 aaKnown RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 PKP1Q13835 747 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 KARSQ15046 597 aaKnown RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 ARL6IP4Q66PJ3 421 aaKnown RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 SLC27A1Q6PCB7 646 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 TMC7Q7Z402 723 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 VPS52Q8N1B4 723 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 MRPL43Q8N983 215 aaKnown RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 DEPTORQ8TB45 409 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 EPSTI1Q96J88 318 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 CLIC6Q96NY7 704 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 PAAF1Q9BRP4 392 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 APOL5Q9BWW9 433 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 ZBP1Q9H171 429 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 EPHX3Q9H6B9 360 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 PRMT7Q9NVM4 692 aaPredicted RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 PARP2Q9UGN5 583 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 FBXO2Q9UK22 296 aaPredicted RBP14.07□□□□□ -0.16
GPC1-204ENST00000426280 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 TCHHQ07283 1943 aa14.07□□□□□ -0.16
GPC1-204ENST00000426280 BRWD1Q9NSI6 2320 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 PTGESO14684 152 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 SLC16A4O15374 487 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 MEFVO15553 781 aaPredicted RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 CLASP2O75122 1294 aaKnown RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 SSBP05455 408 aaKnown RBP eCLIP14.06□□□□□ -0.16
GPC1-204ENST00000426280 PLA2G4BP0C869 781 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 KRT17Q04695 432 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 DSC1Q08554 894 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 PRPF4BQ13523 1007 aaKnown RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 DHX8Q14562 1220 aaKnown RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 PCBP1Q15365 356 aaKnown RBP eCLIP14.06□□□□□ -0.16
GPC1-204ENST00000426280 LLGL2Q6P1M3 1020 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 SYCE2Q6PIF2 218 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 DDX53Q86TM3 631 aaKnown RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 ZBTB8OSQ8IWT0 167 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 TMEM130Q8N3G9 435 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms