RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 RASSF8Q8NHQ8 419 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 LPPQ93052 612 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 RSAD1Q9HA92 442 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 BLOC1S4Q9NUP1 217 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 KCNG1Q9UIX4 513 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 PLAGL2Q9UPG8 496 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 IPPQ9Y573 584 aa23.58■■□□□ 1.37
CPNE1-211ENST00000420363 ACKR2O00590 384 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 INPPL1O15357 1258 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 B4GALT5O43286 388 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 YEATS4O95619 227 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 ITGB1P05556 798 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 PPM1AP35813 382 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 NPTX2P47972 431 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 NOMO2Q5JPE7 1267 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 ATL3Q6DD88 541 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 HACE1Q8IYU2 909 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 LINC00301Q8NCQ3 95 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 SMG8Q8ND04 991 aaKnown RBP23.57■■□□□ 1.36
CPNE1-211ENST00000420363 RAD54LQ92698 747 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 PLIN2Q99541 437 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 EIF2AQ9BY44 585 aaKnown RBP23.57■■□□□ 1.36
CPNE1-211ENST00000420363 C11orf16Q9NQ32 467 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 ARHGAP28Q9P2N2 729 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 HCSTQ9UBK5 93 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 ODF2LQ9ULJ1 636 aa23.57■■□□□ 1.36
CPNE1-211ENST00000420363 ARIH1Q9Y4X5 557 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-211ENST00000420363 MEIS3P2A8K0S8 358 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 N4BP3O15049 544 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 PPP6R2O75170 966 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 OFD1O75665 1012 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 SSBP05455 408 aaKnown RBP eCLIP23.56■■□□□ 1.36
CPNE1-211ENST00000420363 ALADP13716 330 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 PRPF4BQ13523 1007 aaKnown RBP23.56■■□□□ 1.36
CPNE1-211ENST00000420363 STK38Q15208 465 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 LRRC15Q8TF66 581 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 SPIRE2Q8WWL2 714 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 LARP4BQ92615 738 aaKnown RBP23.56■■□□□ 1.36
CPNE1-211ENST00000420363 EPSTI1Q96J88 318 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 ZNF558Q96NG5 402 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 KIFC3Q9BVG8 833 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 TRIM6Q9C030 488 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-211ENST00000420363 TMEM134Q9H6X4 195 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 STK17AQ9UEE5 414 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 CCDC39Q9UFE4 941 aa23.56■■□□□ 1.36
CPNE1-211ENST00000420363 RBM19Q9Y4C8 960 aaKnown RBP23.56■■□□□ 1.36
CPNE1-211ENST00000420363 CSPG5O95196 566 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 PEX3P56589 373 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 PLCB3Q01970 1234 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 KCNT2Q6UVM3 1135 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 SPPL3Q8TCT6 385 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 URGCPQ8TCY9 931 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 KCNN1Q92952 543 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 PDZD7Q9H5P4 517 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 TBC1D13Q9NVG8 400 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 KANSL3Q9P2N6 904 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 LZTS1Q9Y250 596 aa23.55■■□□□ 1.36
CPNE1-211ENST00000420363 SPTLC2O15270 562 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 FGF18O76093 207 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 ITGA4P13612 1032 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 PLS3P13797 630 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 HYAL1Q12794 435 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 GPBP1Q86WP2 473 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 THNSL1Q8IYQ7 743 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 CLIC6Q96NY7 704 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 ADPGKQ9BRR6 497 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 NTPCRQ9BSD7 190 aaKnown RBP23.54■■□□□ 1.36
CPNE1-211ENST00000420363 IGFLR1Q9H665 355 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 ALG13Q9NP73 1137 aaKnown RBP23.54■■□□□ 1.36
CPNE1-211ENST00000420363 KMT5AQ9NQR1 393 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 PRKAG3Q9UGI9 489 aa23.54■■□□□ 1.36
CPNE1-211ENST00000420363 CCDC169A6NNP5 214 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 EDN1P05305 212 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 SCP2P22307 547 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 LTBRP36941 435 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 PKP1Q13835 747 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 CAMK1Q14012 370 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 BECN1Q14457 450 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 CTC1Q2NKJ3 1217 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 ARSHQ5FYA8 562 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 SPECC1Q5M775 1068 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 USP49Q70CQ1 688 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 SPRYD3Q8NCJ5 442 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 NXF3Q9H4D5 531 aaKnown RBP23.53■■□□□ 1.36
CPNE1-211ENST00000420363 POLD4Q9HCU8 107 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 LARSQ9P2J5 1176 aaKnown RBP23.53■■□□□ 1.36
CPNE1-211ENST00000420363 INPP5FQ9Y2H2 1132 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 GIT1Q9Y2X7 761 aa23.53■■□□□ 1.36
CPNE1-211ENST00000420363 H0YCG3 227 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 K7ERI5 159 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 NPTXRO95502 500 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 DDIT3P35638 169 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 ZNF131P52739 623 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 SMTNP53814 917 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 CLUL1Q15846 466 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 DCAF4L1Q3SXM0 396 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 LONRF3Q496Y0 759 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 KCNG4Q8TDN1 519 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 POF1BQ8WVV4 589 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 PPP2R3CQ969Q6 453 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms