RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DNAAF3Q8N9W5 541 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 REEP2Q9BRK0 252 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 VIL1P09327 827 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 PNPLA4P41247 253 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 CAPN11Q9UMQ6 739 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 ABCC6O95255 1503 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 ITIH6Q6UXX5 1313 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 MOCS3O95396 460 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 S100BP04271 92 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 PDE1BQ01064 536 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 DCAF4L1Q3SXM0 396 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 ACER1Q8TDN7 264 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 DHX38Q92620 1227 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 STMN2Q93045 179 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 ADGRG1Q9Y653 693 aa17.92■□□□□ 0.46
PCDHA13-202ENST00000409494 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 TAAR1Q96RJ0 339 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 CACYBPQ9HB71 228 aaKnown RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 PCNX4Q63HM2 1172 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 RAB44Q7Z6P3 723 aaPredicted RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 SDCCAG8Q86SQ7 713 aaPredicted RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 STK33Q9BYT3 514 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 SSU72P8A0A1W2PR75 194 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 RPS6KA5O75582 802 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 RALAP11233 206 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 CXCR5P32302 372 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 DSG3P32926 999 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 RECQLP46063 649 aaPredicted RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 Q4G0T1 1027 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 GLB1LQ6UWU2 654 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 SCN4BQ8IWT1 228 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 ZKSCAN4Q969J2 545 aaPredicted RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 KLC2Q9H0B6 622 aa17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 MED1Q15648 1581 aaPredicted RBP17.91■□□□□ 0.46
PCDHA13-202ENST00000409494 ZBBXA8MT70 800 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 ZNF18P17022 549 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 CA4P22748 312 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 NMT1P30419 496 aaKnown RBP17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 TMEM132DQ14C87 1099 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 GNASQ5JWF2 1037 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 TAF6LQ9Y6J9 622 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 VCAM1P19320 739 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 SLC1A1P43005 524 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 E4F1Q66K89 784 aaPredicted RBP17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 SAAL1Q96ER3 474 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 ADAM21Q9UKJ8 722 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 FMN2Q9NZ56 1722 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 NAA35Q5VZE5 725 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 ANKRD40Q6AI12 368 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 NUDT18Q6ZVK8 323 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 SPATA24Q86W54 205 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 FOXP2O15409 715 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 APOEP02649 317 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 PRAMEF18Q5VWM3 479 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 NOTUMQ6P988 496 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 ADAT2Q7Z6V5 191 aaKnown RBP17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 HPCAL4Q9UM19 191 aa17.9■□□□□ 0.46
PCDHA13-202ENST00000409494 M0QYV0 167 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 WNT10BO00744 389 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 FOXN1O15353 648 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 BUB1BO60566 1050 aaPredicted RBP17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 CTDNEP1O95476 244 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 CHGBP05060 677 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 PCSK1P29120 753 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 HNRNPH2P55795 449 aaKnown RBP17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 ACTR2P61160 394 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 THOC5Q13769 683 aaKnown RBP17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 RPS6KA2Q15349 733 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 NBPF9Q3BBW0 867 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 PDXDC1Q6P996 788 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 CENPUQ71F23 418 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 PARVAQ9NVD7 372 aa17.89■□□□□ 0.46
PCDHA13-202ENST00000409494 DPYSL4O14531 572 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 TEX33O43247 280 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 CLTAP09496 248 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 NNMTP40261 264 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 NBPF12Q5TAG4 269 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 TTC19Q6DKK2 380 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 MYMKA6NI61 221 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 FTCDO95954 541 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 SHMT1P34896 483 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 EPHB1P54762 984 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 PSMC1P62191 440 aaKnown RBP17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 MYBPC2Q14324 1141 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 RHOT1Q8IXI2 618 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 RYBPQ8N488 228 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 RFFLQ8WZ73 363 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 FAM170AA1A519 330 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 HGSO14964 777 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 HOXA2O43364 376 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 STAG3L1P0CL83 205 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 ITGA4P13612 1032 aa17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 SF3A3Q12874 501 aaKnown RBP eCLIP17.89■□□□□ 0.45
PCDHA13-202ENST00000409494 SUPT20HL2P0C7V6 817 aa17.88■□□□□ 0.45
PCDHA13-202ENST00000409494 PAMP19021 973 aa17.88■□□□□ 0.45
PCDHA13-202ENST00000409494 SV2CQ496J9 727 aa17.88■□□□□ 0.45
PCDHA13-202ENST00000409494 ATF7IP2Q5U623 682 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms