RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RHBDL2Q9NX52 303 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 MTUS1Q9ULD2 1270 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PCDH11YQ9BZA8 1340 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 TMEM221A6NGB7 291 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 C2CD2LO14523 706 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 HNRNPRO43390 633 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 RAD21O60216 631 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 TBX10O75333 385 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 KRT36O76013 467 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CBX6O95503 412 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CYP1A1P04798 512 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC5A1P13866 664 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CREB1P16220 341 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 MUTP22033 750 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC18A1P54219 525 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PPATQ06203 517 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 R3HDM1Q15032 1099 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC4A8Q2Y0W8 1093 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 WDR72Q3MJ13 1102 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 KRT25Q7Z3Z0 450 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC25Q86WR0 208 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC35G2Q8TBE7 412 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PIP4K2CQ8TBX8 421 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 RASGRP4Q8TDF6 673 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 C10orf82Q8WW14 230 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PPP2R3CQ969Q6 453 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 HAUS1Q96CS2 278 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 RAB34Q9BZG1 259 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 EPB41L1Q9H4G0 881 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 WHRNQ9P202 907 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 DNAJB4Q9UDY4 337 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC88AQ3V6T2 1871 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ADAMTS3O15072 1205 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ADAMTS2O95450 1211 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ACSL3O95573 720 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 GCP02774 474 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ZCCHC18P0CG32 403 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 GLI3P10071 1580 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 VAV1P15498 845 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ZFXP17010 805 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 IGHMBP2P38935 993 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 TECP42680 631 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 GALCP54803 685 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CABP4P57796 275 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 KCNH2Q12809 1159 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 MPP2Q14168 576 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SPARCL1Q14515 664 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ZC2HC1CQ53FD0 456 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ACSBG2Q5FVE4 666 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SEL1L2Q5TEA6 688 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 MEX3CQ5U5Q3 659 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 DYMQ7RTS9 669 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ADAT2Q7Z6V5 191 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF554Q86TJ5 538 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC125Q86Z20 511 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 U2AF1L4Q8WU68 220 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 RAD54LQ92698 747 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 LZTS2Q9BRK4 669 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CADM1Q9BY67 442 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PCDH18Q9HCL0 1135 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 TYW1Q9NV66 732 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PTTG2Q9NZH5 202 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ITGB1BP2Q9UKP3 347 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PPP1R9AQ9ULJ8 1098 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 RTCBQ9Y3I0 505 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 MROH5Q6ZUA9 1318 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 A0A1W2PRG0 241 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 F8W8V4 182 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CCNT1O60563 726 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 EDF1O60869 148 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 TTC4O95801 387 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 OATP04181 439 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 VIL1P09327 827 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 IDO1P14902 403 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 FOXN2P32314 431 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 COPB2P35606 906 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 MAGEA10P43363 369 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CAV1Q03135 178 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CYP1B1Q16678 543 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 TMEM266Q2M3C6 531 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 USH1GQ495M9 461 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 UBAP2Q5T6F2 1119 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 RFWD3Q6PCD5 774 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ZC3H3Q8IXZ2 948 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC105Q8IYK2 499 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX17Q92841 729 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM163AQ96GL9 167 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 TUBGCP5Q96RT8 1024 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CRAMP1Q96RY5 1269 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 SLX1AQ9BQ83 275 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 RMI1Q9H9A7 625 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 KRT82Q9NSB4 513 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 BLOC1S4Q9NUP1 217 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 STK32BQ9NY57 414 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 SH3GLB1Q9Y371 365 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ARAP2Q8WZ64 1704 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 GYG2O15488 501 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 GSC2O15499 205 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ASMTLO95671 621 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms