RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 CBWD5Q5RIA9 395 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 C16orf45Q96MC5 204 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 ZMYND15Q9H091 742 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 INTS2Q9H0H0 1204 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 MMRN2Q9H8L6 949 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 SCN10AQ9Y5Y9 1956 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 MBLAC1A4D2B0 266 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 F8VZ95 297 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 MMP3P08254 477 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 CCDC172P0C7W6 258 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 SLC9A1P19634 815 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 KIF11P52732 1056 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 PTENP60484 403 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 MYL7Q01449 175 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 TFDP1Q14186 410 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 BMS1Q14692 1282 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 SURF1Q15526 300 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 PAPD7Q5XG87 772 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 CPLX3Q8WVH0 158 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 TSPAN18Q96SJ8 248 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 APBA2Q99767 749 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 PDGFCQ9NRA1 345 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 GCNT4Q9P109 453 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 CNTNAP2Q9UHC6 1331 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 RRN3P2A6NIE6 340 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 LRRIQ3A6PVS8 624 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 CES2O00748 559 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 KIF3CO14782 793 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 CA12O43570 354 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 KPNA6O60684 536 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 F2P00734 622 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 SMPD1P17405 629 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 SOX5P35711 763 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 AMPD2Q01433 879 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 GCNT1Q02742 428 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 PPP3CAQ08209 521 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 NCBP1Q09161 790 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 KRT39Q6A163 491 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 IQCEQ6IPM2 695 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 FAM43BQ6ZT52 329 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 RRAGAQ7L523 313 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 ZNF410Q86VK4 478 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 KSR1Q8IVT5 923 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 CCDC155Q8N6L0 562 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 SMC1BQ8NDV3 1235 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 ACO2Q99798 780 aaKnown RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 HAPLN2Q9GZV7 340 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 TMEM117Q9H0C3 514 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 ZFYVE28Q9HCC9 887 aa7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 FAM207AQ9NSI2 230 aaPredicted RBP7.43□□□□□ -1.22
CX3CR1-202ENST00000399220 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ACKR2O00590 384 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 TOM1L1O75674 476 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 C4BPAP04003 597 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 RGS2P41220 211 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 STAT1P42224 750 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ZNF157P51786 506 aaPredicted RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 POLR2FP61218 127 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 LAMTOR4Q0VGL1 99 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 CETN1Q12798 172 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 STRN3Q13033 797 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 AMHR2Q16671 573 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 UBR7Q8N806 425 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 CCDC42Q96M95 316 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 IKZF4Q9H2S9 585 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ZNF215Q9UL58 517 aaPredicted RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 TNFSF13BQ9Y275 285 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 PCDHA13Q9Y5I0 950 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 MRFAP1Q9Y605 127 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 NCANO14594 1321 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 KRT86O43790 486 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 KIF5CO60282 957 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 CAPN15O75808 1086 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 EIF4A3P38919 411 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 CYP2J2P51589 502 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 MBTD1Q05BQ5 628 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ITIH3Q06033 890 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 NAB2Q15742 525 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ASIC2Q16515 512 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ZACNQ401N2 412 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 MARCH8Q5T0T0 291 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 CACNA2D4Q7Z3S7 1137 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 BRSK2Q8IWQ3 736 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 FAM71AQ8IYT1 594 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ACRBPQ8NEB7 543 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 DEPTORQ8TB45 409 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 PRPF31Q8WWY3 499 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 SHC3Q92529 594 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 CGRRF1Q99675 332 aa7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 MRPL4Q9BYD3 311 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 TRMT1Q9NXH9 659 aaKnown RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 AJAP1Q9UKB5 411 aaPredicted RBP7.42□□□□□ -1.22
CX3CR1-202ENST00000399220 ZNF233A6NK53 670 aa7.41□□□□□ -1.22
CX3CR1-202ENST00000399220 CCDC169A6NNP5 214 aa7.41□□□□□ -1.22
CX3CR1-202ENST00000399220 STAU1O95793 577 aaKnown RBP7.41□□□□□ -1.22
CX3CR1-202ENST00000399220 EDN1P05305 212 aa7.41□□□□□ -1.22
CX3CR1-202ENST00000399220 RPLP2P05387 115 aaKnown RBP7.41□□□□□ -1.22
CX3CR1-202ENST00000399220 DLG4P78352 724 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms