RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CENPTQ96BT3 561 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 C18orf8Q96DM3 657 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 CCDC114Q96M63 670 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 FAM129AQ9BZQ8 928 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 MARCKSL1P49006 195 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 DRG2P55039 364 aaKnown RBP19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 ODR4Q5SWX8 454 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 CPLX4Q7Z7G2 160 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 RHOT2Q8IXI1 618 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 RDH13Q8NBN7 331 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 NEK9Q8TD19 979 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 KRT35Q92764 455 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 GRHL1Q9NZI5 618 aa19.79■□□□□ 0.76
PCDHA1-202ENST00000394633 PHF2O75151 1096 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 KRT13P13646 458 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 GKAP1Q5VSY0 366 aaPredicted RBP19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 STXBP4Q6ZWJ1 553 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 HOOK2Q96ED9 719 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 SYNGAP1Q96PV0 1343 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 A0A1W2PRG0 241 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 EXOC3O60645 756 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 CLUL1Q15846 466 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 LACTB2Q53H82 288 aaPredicted RBP19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 UBAP2Q5T6F2 1119 aaKnown RBP19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 DENND2CQ68D51 928 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 CHADLQ6NUI6 762 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 C11orf63Q6NUN7 778 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 MIGA2Q7L4E1 593 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 ZDHHC14Q8IZN3 488 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 PRELID2Q8N945 189 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 CHMP6Q96FZ7 201 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 STRA6Q9BX79 667 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 ADAM7Q9H2U9 754 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 CD248Q9HCU0 757 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 PGAP2Q9UHJ9 254 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 RASAL2Q9UJF2 1139 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 ODF2LQ9ULJ1 636 aa19.78■□□□□ 0.76
PCDHA1-202ENST00000394633 RPTORQ8N122 1335 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 CFBP00751 764 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 FTLP02792 175 aaPredicted RBP19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 CHN1P15882 459 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 CDR1P51861 262 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 UBXN2AP68543 259 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 DLG4P78352 724 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 CCDC91Q7Z6B0 441 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 SLC9A9Q8IVB4 645 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 ARHGEF19Q8IW93 802 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 SPICE1Q8N0Z3 855 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 PGM2Q96G03 612 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 NACC1Q96RE7 527 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 CTTNBP2NLQ9P2B4 639 aa19.77■□□□□ 0.76
PCDHA1-202ENST00000394633 TMEM110-MUSTN1A8MSY1 372 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 CTNND1O60716 968 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 GAS7O60861 476 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 GH2P01242 217 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 RFX1P22670 979 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 RPL21P46778 160 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 FKBP1CQ5VVH2 108 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 TTC27Q6P3X3 843 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 TRPM4Q8TD43 1214 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 ZNF317Q96PQ6 595 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 UBE2TQ9NPD8 197 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 A1CFQ9NQ94 594 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 ZNFX1Q9P2E3 1918 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 MIF4GDA9UHW6 222 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 CTNNA2P26232 953 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 CHRNA3P32297 505 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 MMP13P45452 471 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 SCTRP47872 440 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 TCEAL1Q15170 157 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 FAM83AQ86UY5 434 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 SYCP3Q8IZU3 236 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 ATXN2LQ8WWM7 1075 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 CCT6BQ92526 530 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 NCAPGQ9BPX3 1015 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 ZSWIM1Q9BR11 485 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 UNC45AQ9H3U1 944 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 AZI2Q9H6S1 392 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 PCYOX1Q9UHG3 505 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 EMSYQ7Z589 1322 aa19.76■□□□□ 0.75
PCDHA1-202ENST00000394633 TLDC2A0PJX2 215 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 HIP1RO75146 1068 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 BCRP11274 1271 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 HSPA6P17066 643 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 SLC29A2Q14542 456 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 RASA3Q14644 834 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 DAW1Q8N136 415 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 UBL4BQ8N7F7 174 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 SELENOSQ9BQE4 189 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 SEMA4AQ9H3S1 761 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 KCND2Q9NZV8 630 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 RNF181Q9P0P0 153 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 PCDHA3Q9Y5H8 950 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 PFASO15067 1338 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 CCDC169A6NNP5 214 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 CHUKO15111 745 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 MUTP22033 750 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms