RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 APBA1Q02410 837 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 TAF1CQ15572 869 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 RASIP1Q5U651 963 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 HAUS6Q7Z4H7 955 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 BHMTQ93088 406 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 H3BRJ5 948 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 FGFR4P22455 802 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 SFNP31947 248 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 PDCLQ13371 301 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 BTBD8Q5XKL5 378 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 EPM2AIP1Q7L775 607 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 TRIM59Q8IWR1 403 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ASIC4Q96FT7 647 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 EGFL8Q99944 293 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 FBXL5Q9UKA1 691 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 MAP2K2P36507 400 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 VCPP55072 806 aaKnown RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 CDR2LQ86X02 465 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 RMDN1Q96DB5 314 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 PPARGC1AQ9UBK2 798 aaKnown RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 GOLGA8RI6L899 631 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 MMEP08473 750 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 SOX11P35716 441 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 TBC1D1Q86TI0 1168 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 RFWD2Q8NHY2 731 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 TRPM1Q7Z4N2 1603 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 C2CD2LO14523 706 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 AMHR2Q16671 573 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 HEATR6Q6AI08 1181 aaKnown RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 TRIM42Q8IWZ5 723 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 ARL8AQ96BM9 186 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 AGBL1Q96MI9 1066 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 AGAP1Q9UPQ3 857 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 RRP15Q9Y3B9 282 aaKnown RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 TTC26A0AVF1 554 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 GGPS1O95749 300 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 TAC1P20366 129 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 SPATA2LQ8IUW3 424 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 H0Y3Z8 333 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 PRPF4O43172 522 aaKnown RBP eCLIP18.23■□□□□ 0.512e-6■■■□□ 15.1
MCF2L-203ENST00000375604 CHEK2O96017 543 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 ATP1A1P05023 1023 aaKnown RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 NAA30Q147X3 362 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 EZH2Q15910 746 aaKnown RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 SEZ6Q53EL9 994 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 DPF2Q92785 391 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 CCDC138Q96M89 665 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 MGEA5O60502 916 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 HOXD10P28358 340 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 CRLF3Q8IUI8 442 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 DHX38Q92620 1227 aaKnown RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 SEPT5Q99719 369 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-203ENST00000375604 ITM2BQ9Y287 266 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 PCDHA10Q9Y5I2 948 aa18.23■□□□□ 0.51
MCF2L-203ENST00000375604 DNAJC6O75061 913 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 CALB1P05937 261 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 CDH6P55285 790 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 KIFC3Q9BVG8 833 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 GGT7Q9UJ14 662 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 ZNRF3Q9ULT6 936 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 TTI1O43156 1089 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 DPEP1P16444 411 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 KPNA2P52292 529 aaKnown RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 SLC13A4Q9UKG4 626 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 SPHKAPQ2M3C7 1700 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 ATMINO43313 823 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 KRT14P02533 472 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 PMS2P54278 862 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 WDR72Q3MJ13 1102 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 SH3KBP1Q96B97 665 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 OSBPL9Q96SU4 736 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 ZNF609O15014 1411 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 ITPK1Q13572 414 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 KRT39Q6A163 491 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 PBXIP1Q96AQ6 731 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 RBM41Q96IZ5 413 aaKnown RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 PITPNM3Q9BZ71 974 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 SFMBT1Q9UHJ3 866 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 CDC42BPBQ9Y5S2 1711 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 SNX9Q9Y5X1 595 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 GMPSP49915 693 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 MAGOHP61326 146 aaKnown RBP18.22■□□□□ 0.51
MCF2L-203ENST00000375604 ORC1Q13415 861 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 PPP1R18Q6NYC8 613 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 PI4K2AQ9BTU6 479 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 C2orf40Q9H1Z8 148 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 HSPBP1Q9NZL4 362 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 TRIM10Q9UDY6 481 aa18.22■□□□□ 0.51
MCF2L-203ENST00000375604 OR6P1Q8NGX9 317 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 HPS4Q9NQG7 708 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 IP6K2Q9UHH9 426 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 C6orf118Q5T5N4 469 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 NDUFAF2Q8N183 169 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 MTMR4Q9NYA4 1195 aa18.21■□□□□ 0.51
MCF2L-203ENST00000375604 TADA2AO75478 443 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms