RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
UBR4-203ENST00000375225 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
UBR4-203ENST00000375225 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 AGPSO00116 658 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 NFIBO00712 420 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 ZBTB39O15060 712 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 RAD51CO43502 376 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 GLI1P08151 1106 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 XKR9Q5GH70 373 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 C11orf63Q6NUN7 778 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 GJB7Q6PEY0 223 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 DAW1Q8N136 415 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 ARFGAP2Q8N6H7 521 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 METTL13Q8N6R0 699 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 C2orf69Q8N8R5 385 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 RMDN3Q96TC7 470 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 UBE2TQ9NPD8 197 aaPredicted RBP13.21□□□□□ -0.29
UBR4-203ENST00000375225 PXMP2Q9NR77 195 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 NFU1Q9UMS0 254 aa13.21□□□□□ -0.29
UBR4-203ENST00000375225 HMGB1P1B2RPK0 211 aaPredicted RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 RTN2O75298 545 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 PPFIA4O75335 1185 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 MYCLP12524 364 aaPredicted RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 EIF2AK2P19525 551 aaKnown RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 CARSP49589 748 aaKnown RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 CDR1P51861 262 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 RPS6P62753 249 aaKnown RBP13.2□□□□□ -0.3
UBR4-203ENST00000375225 GPC5P78333 572 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 PLS1Q14651 629 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 SPDYCQ5MJ68 293 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 FAM102BQ5T8I3 360 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 RUFY4Q6ZNE9 571 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 ENOSF1Q7L5Y1 443 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 MCPH1Q8NEM0 835 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 SPIRE2Q8WWL2 714 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 CASKIN2Q8WXE0 1202 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 PLVAPQ9BX97 442 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 CAPS2Q9BXY5 557 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 POLD4Q9HCU8 107 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 RNF146Q9NTX7 359 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 PKD2L1Q9P0L9 805 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 AGTPBP1Q9UPW5 1226 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 TRPM7Q96QT4 1865 aa13.2□□□□□ -0.3
UBR4-203ENST00000375225 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 KIAA0391O15091 583 aaKnown RBP13.19□□□□□ -0.3
UBR4-203ENST00000375225 PSAPP07602 524 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 GZMAP12544 262 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 OSBPP22059 807 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 PEX3P56589 373 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 MCCD1P59942 119 aaPredicted RBP13.19□□□□□ -0.3
UBR4-203ENST00000375225 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
UBR4-203ENST00000375225 DHX34Q14147 1143 aaKnown RBP13.19□□□□□ -0.3
UBR4-203ENST00000375225 KRT39Q6A163 491 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 RPS6KC1Q96S38 1066 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 PDCD2LQ9BRP1 358 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 SYT11Q9BT88 431 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
UBR4-203ENST00000375225 KIAA1586Q9HCI6 787 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 TMEM8AQ9HCN3 771 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBR4-203ENST00000375225 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 AJAP1Q9UKB5 411 aaPredicted RBP13.19□□□□□ -0.3
UBR4-203ENST00000375225 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
UBR4-203ENST00000375225 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 SART1O43290 800 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 BUB1BO60566 1050 aaPredicted RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.33e-14■■□□□ 13.2
UBR4-203ENST00000375225 CELF2O95319 508 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 RTP1P59025 263 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 SKOR1P84550 965 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 TMEM132BQ14DG7 1078 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms