RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MARSP56192 900 aaKnown RBP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 PPATQ06203 517 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 SLC35G1Q2M3R5 365 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 ZNF568Q3ZCX4 644 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 FBXO33Q7Z6M2 555 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 LCA5Q86VQ0 697 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 MYLK4Q86YV6 388 aaPredicted RBP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 RAD54LQ92698 747 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 NUDT12Q9BQG2 462 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 SPATA16Q9BXB7 569 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 CRNKL1Q9BZJ0 848 aaKnown RBP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 TBK1Q9UHD2 729 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 PTPN22Q9Y2R2 807 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 PENKP01210 267 aaPredicted RBP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 SPATA31D3P0C874 917 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 ABCB4P21439 1286 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 RASSF2P50749 326 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 LRRC74BQ6ZQY2 392 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 SPATA31D4Q6ZUB0 917 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 NCSTNQ92542 709 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 RBM17Q96I25 401 aaKnown RBP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 DHX36Q9H2U1 1008 aaKnown RBP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 NKIRAS1Q9NYS0 192 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 INTUQ9ULD6 942 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 SCN7AQ01118 1682 aa22.04■■□□□ 1.12
TMEFF1-201ENST00000374879 CYP2D6P10635 497 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 CHRNA3P32297 505 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 CCDC137Q6PK04 289 aaKnown RBP22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 VPS36Q86VN1 386 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 SPOCK2Q92563 424 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 MIPEPQ99797 713 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 TFCP2L1Q9NZI6 479 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 FAM196BA6NMK8 535 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 CAPN9O14815 690 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 PON1P27169 355 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 PRDX5P30044 214 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 STRN3Q13033 797 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 DNAJC3Q13217 504 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 EXOC3L4Q17RC7 722 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 TRMT10CQ7L0Y3 403 aaKnown RBP22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 PCYOX1Q9UHG3 505 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 RPL26L1Q9UNX3 145 aaKnown RBP22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 STARD13Q9Y3M8 1113 aa22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.03■■□□□ 1.12
TMEFF1-201ENST00000374879 TRAFD1O14545 582 aaPredicted RBP22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 ETS2P15036 469 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 PTPN4P29074 926 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 INHBCP55103 352 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 KCNQ4P56696 695 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 SLC4A8Q2Y0W8 1093 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 SRRM1Q8IYB3 904 aaKnown RBP22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 LNX1Q8TBB1 728 aaPredicted RBP22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 DTX3LQ8TDB6 740 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 SLCO1B3Q9NPD5 702 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 ARPP21Q9UBL0 812 aaPredicted RBP22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 TMCO1Q9UM00 188 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 PHTF1Q9UMS5 762 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 CASZ1Q86V15 1759 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 ATAD5Q96QE3 1844 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 TSPY2A6NKD2 308 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 TBX10O75333 385 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 MOGSQ13724 837 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 GJB7Q6PEY0 223 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 SMIM5Q71RC9 77 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 TLE6Q9H808 572 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 AAASQ9NRG9 546 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 BARHL2Q9NY43 387 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 HDAC9Q9UKV0 1011 aa22.02■■□□□ 1.12
TMEFF1-201ENST00000374879 ATP6V1G1O75348 118 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 SLC34A1Q06495 639 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 TAF1BQ53T94 588 aaPredicted RBP22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 ACSBG2Q5FVE4 666 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 FAM26FQ5R3K3 315 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 KBTBD2Q8IY47 623 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 ARHGAP18Q8N392 663 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 LINC00116Q8NCU8 138 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 DNAJC19Q96DA6 116 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 ZNF232Q9UNY5 417 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 CYTH3O43739 400 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 DCTN3O75935 186 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 WDR4P57081 412 aaKnown RBP22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 NONOQ15233 471 aaKnown RBP eCLIP22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 RFFLQ8WZ73 363 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 MTMR7Q9Y216 660 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 JAG2Q9Y219 1238 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 SLC4A7Q9Y6M7 1214 aa22.01■■□□□ 1.11
TMEFF1-201ENST00000374879 POTEMA6NI47 508 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 TTLL1O95922 423 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 LYNP07948 512 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 CETPP11597 493 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 HIBADHP31937 336 aaKnown RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 USP46P62068 366 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 MTA1Q13330 715 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 LSAMPQ13449 338 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 CTTNQ14247 550 aaKnown RBP22■■□□□ 1.11
TMEFF1-201ENST00000374879 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 GALNT17Q6IS24 598 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 NEK8Q86SG6 692 aa22■■□□□ 1.11
TMEFF1-201ENST00000374879 CADM1Q9BY67 442 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms