RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 FAM71BQ8TC56 605 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 PARD3BQ8TEW8 1205 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 CASKIN2Q8WXE0 1202 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 RFFLQ8WZ73 363 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 PCDHB18PQ96TA0 734 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 RNF14Q9UBS8 474 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 GOLGA6BA6NDN3 693 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 ZBTB48P10074 688 aaPredicted RBP17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 ABHD15Q6UXT9 468 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 HOXC10Q9NYD6 342 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 BTBD7Q9P203 1132 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 TMEM253P0C7T8 217 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 ATP4AP20648 1035 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 ANXA13P27216 316 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 OAZ1P54368 228 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 AADACL2Q6P093 401 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 SLFN11Q7Z7L1 901 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 TATDN2Q93075 761 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 VIPAS39Q9H9C1 493 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 SNCAIPQ9Y6H5 919 aa17.27■□□□□ 0.36
CNKSR1-202ENST00000374253 SPATA31C2B4DYI2 1134 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 KRIT1O00522 736 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 CPNE8Q86YQ8 564 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 KIFAP3Q92845 792 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 TIPINQ9BVW5 301 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 CTTNBP2NLQ9P2B4 639 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 AMFRQ9UKV5 643 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 MYH9P35579 1960 aaKnown RBP17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 A0A0A6YYK5 440 aaPredicted RBP17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 PGRMC1O00264 195 aaKnown RBP17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 MMEP08473 750 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 EPHB4P54760 987 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 WNT7BP56706 349 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 GNPTABQ3T906 1256 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 DCAF12L1Q5VU92 463 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 GADL1Q6ZQY3 521 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 IFT20Q8IY31 132 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 LMBR1Q8WVP7 490 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 BTBD6Q96KE9 485 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 SENP7Q9BQF6 1050 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 ATP6V0A4Q9HBG4 840 aa17.26■□□□□ 0.35
CNKSR1-202ENST00000374253 MAFGO15525 162 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 DGAT1O75907 488 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 CHRNB2P17787 502 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 AARSP49588 968 aaKnown RBP eCLIP17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 ACOT2P49753 483 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 KRT39Q6A163 491 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 NCAPG2Q86XI2 1143 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 EPS8L1Q8TE68 723 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 ZBTB45Q96K62 511 aaPredicted RBP17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 PBKQ96KB5 322 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 MED4Q9NPJ6 270 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 GDF3Q9NR23 364 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 AMACRQ9UHK6 382 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 INTUQ9ULD6 942 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 NCANO14594 1321 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 CLSTN1O94985 981 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 FGGP02679 453 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 TNNC1P63316 161 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 EMC2Q15006 297 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 STXBP2Q15833 593 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 SEZ6Q53EL9 994 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 MIS18BP1Q6P0N0 1132 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 SV2AQ7L0J3 742 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 MSL3Q8N5Y2 521 aaKnown RBP17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 RDM1Q8NG50 284 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 SUCLA2Q9P2R7 463 aaPredicted RBP17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 TMEM59LQ9UK28 342 aa17.25■□□□□ 0.35
CNKSR1-202ENST00000374253 ANKRD62A6NC57 917 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 LRRIQ4A6NIV6 560 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 SART1O43290 800 aaKnown RBP17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 HARSP12081 509 aaKnown RBP17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 MARCKSL1P49006 195 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 ERVK-9P63128 1117 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 PPATQ06203 517 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 CYP24A1Q07973 514 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 HLTFQ14527 1009 aaKnown RBP eCLIP17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 LLGL1Q15334 1064 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 PHLDB2Q86SQ0 1253 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 SYCE1Q8N0S2 351 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 GPC2Q8N158 579 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 ASAP3Q8TDY4 903 aa17.24■□□□□ 0.35
CNKSR1-202ENST00000374253 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms